Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00247 ATGGAGTTTGACCCACTGTTCTTGCATTGCTGCAAATGGGGAAGAACGACGAAGAGCAATCGCTGCCACCCACTGTGGGATCGGAGCCCACGAACCAGAATGTGGGTGGCCGATGTGGTTATGGGTGGGAGAGAATTCGGAGGATCACTCAAGCTACTTTCGCATTATGCAGATCATCAAATTGTAGCAAGTTTCAATGTTGAGAAGTCTGTTTCTTTTCTTGAAGAGCATGTCCTGCAGCTTGAGGATGATATTTTCGAAGAGATTCCCGTACCTTCAGCGAAGGTCATTATCTTATCTATGGAACCATTAATTGGATCGAATTTAACGGAAGTAGTGTTTGCAGTTGACCCAGAGAGAAGTTATCCAGAGATTCCCGAAACATCCTTAAGTTTGATCAGATCAACTTTTGAAACTCTGGTTCTTAATCGTCCACCTCTTCGCCTCACTACAGACCTGTTAGGAAAACCCGTTTCTTTCGAGGTGCTGAAATTCCGTGGAGGAATTACTATAATTCCCCCGCAAAGTGCATTTCTTTTGCAAAAAGTGCAAATCTATTTCAACTTCACATTAAACTTTTCTATTTACCAAATTCAATCAAATTTCAACAAACTTACAAGCCAGTTGAAGTCGGCACTACGTTTAGCTCCCTATGAGAACATGTATATACGCTTATCGAACACAAGAGGTTCGACTGTTGGCGCACCCACTATTGTTCAGTGCTCTGTTCTGCTGTCAGTCGGGAATACTCCATCAACACGAAGGCTAAAGCAGCTGGCTCAGACCATCACTGGTTTGCACTCGAAAAACCTCGGCCTGAACAATACGGAATTTGGAAGGGTTAAGCAAGTTCGCCTTTCATCGATTCTTAATCACTCGCTCAGTGGTGGTTATGGAAATGGCTCTACTTCATCCCCTTCTCCTGCTCCTGATCATAGTTCCCATCACCGCCGCCACCACCACCGCCACCACCACCCTCAGATAAGCTCTCCGCCCCCCAAGAGAAGTTATGAAAATGGTCCACCTGGCGATCAAATAGGTGCCTCTGCCCCGGAAGATGGCTCACTTGCCCCTCAGATAAGCTCTCCGCCCCCCAAGAGAAGTTATGAAGTGAAGCCACGGAGCAAGGTAAGAAAACGGAATCATTTAGCACCAGCTCCTTCACCAGATATTTCTCCGAAATATGCTGCAGCTTCACCACGAGCTCAAACAAACCCACGGCCACCAGCTTCTCCTACAGTTCTGGCATCAAGTCCGCTTCCTAACGTAATTTACGCCCATCTTCAACCCCCATCTGTAAGTGATCATGGAAAAGACACGACCCCATCAGTTGCACCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCTGGGTAAGTTCAGCGGTGGAATTTAG 1398 46.64 MEFDPLFLHCCKWGRTTKSNRCHPLWDRSPRTRMWVADVVMGGREFGGSLKLLSHYADHQIVASFNVEKSVSFLEEHVLQLEDDIFEEIPVPSAKVIILSMEPLIGSNLTEVVFAVDPERSYPEIPETSLSLIRSTFETLVLNRPPLRLTTDLLGKPVSFEVLKFRGGITIIPPQSAFLLQKVQIYFNFTLNFSIYQIQSNFNKLTSQLKSALRLAPYENMYIRLSNTRGSTVGAPTIVQCSVLLSVGNTPSTRRLKQLAQTITGLHSKNLGLNNTEFGRVKQVRLSSILNHSLSGGYGNGSTSSPSPAPDHSSHHRRHHHRHHHPQISSPPPKRSYENGPPGDQIGASAPEDGSLAPQISSPPPKRSYEVKPRSKVRKRNHLAPAPSPDISPKYAAASPRAQTNPRPPASPTVLASSPLPNVIYAHLQPPSVSDHGKDTTPSVAPSPSPSPSPSPSLGKFSGGI 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2278758 2281550 - Bma003879.1 Bma10g00247 89310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00247 465 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 50 451 - -
Bma10g00247 465 PANTHER F20B24.21 50 451 - -
Bma10g00247 465 MobiDBLite consensus disorder prediction 295 310 - -
Bma10g00247 465 MobiDBLite consensus disorder prediction 295 465 - -
Bma10g00247 465 MobiDBLite consensus disorder prediction 313 329 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01448 Bma10g00247 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02694 Bma-Chr1:84395474 Bma10g00247 Bma-Chr10:2278758 4.87E-112 dispersed
Bma04g01695 Bma-Chr4:53221436 Bma10g00247 Bma-Chr10:2278758 1.38E-50 dispersed
Bma10g00247 Bma-Chr10:2278758 Bma04g01448 Bma-Chr4:49662585 5.72E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00247 - - jre:109008135 414.461