Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00255 ATGGAGCTGTTGCAGTCGTTGGATGCTGAGATTCTTCTGGGTTTTGCTGTAGCTCTTCTTGCCATTGGCGCTGGAGCTCTCTACCTCCTATTTTTCTCCAGGAAATCAACATCCAGAGGCTGTTTGGATCCCGAGAGCTTCAAGGAGTTTAAACTTGTCAAGCGAACAAAGCTAAGCCATAATGTGGCAAAATTTACATTTATTCTTCCAAAACCAACTTCAGTTTTGGGTCTTCCCATTGGACAACACTTAAGTTGCAAGGGCAAGGATGGTCAAGGAGAAGAGGTTATAAAACCATATACTCCGACTACTTTGGACTCCGACGAAGGATATTTTGAGCTTGTCATAAAGATGTACCCACAAGGAAGAATGTCACACCATTTTAGAGAGATGCGTATTGGGGACCATCTTCCTGTAAAAGGACCAAAGGGACGTTTCAAGTACCAACCTGGTCAAGTTAGAGCATTCGGAATGCTGGCCGGTGGCTCCGGCATTACCCCGATGTACCAGGTTGCTCGGGCGATACTAGAGAACCCTGCTGATAAAACAAAGGTACACCTCATATATGCCAATGTTACATATGAGGATATTCTTTTAAAGGAAGAGATTGATTTGCTTGCCTCTCGATATCCGGATAGCTTCAAGATCTACTTCGTCTTGAATCAGCCTCCAGAGAGTTGGAATGGCGGCGTCGGTTTTGTATCGGAGGAAATGATTCAAACCCACTGCCCTGCACCTGCATCTGATATTCAGATTCTAAGGTGCGGCCCCCCGCCAATGAACAAGGCCATGGCAGCTCACCTTGAAGCGCTCGGATATTCGCCGGAGATGCAGTTTCAGTTCTAA 846 46.1 MELLQSLDAEILLGFAVALLAIGAGALYLLFFSRKSTSRGCLDPESFKEFKLVKRTKLSHNVAKFTFILPKPTSVLGLPIGQHLSCKGKDGQGEEVIKPYTPTTLDSDEGYFELVIKMYPQGRMSHHFREMRIGDHLPVKGPKGRFKYQPGQVRAFGMLAGGSGITPMYQVARAILENPADKTKVHLIYANVTYEDILLKEEIDLLASRYPDSFKIYFVLNQPPESWNGGVGFVSEEMIQTHCPAPASDIQILRCGPPPMNKAMAAHLEALGYSPEMQFQF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2354021 2358687 + Bma003887.1 Bma10g00255 89318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00255 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Bma10g00255 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Bma10g00255 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Bma10g00255 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Bma10g00255 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Bma10g00255 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Bma10g00255 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Bma10g00255 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Bma10g00255 281 Gene3D Translation factors 40 140 - -
Bma10g00255 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 138 277 IPR039261 -
Bma10g00255 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 195 206 IPR001709 GO:0016491
Bma10g00255 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 157 176 IPR001709 GO:0016491
Bma10g00255 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 251 259 IPR001709 GO:0016491
Bma10g00255 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Bma10g00255 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Bma10g00255 281 CDD cyt_b5_reduct_like 50 281 - -
Bma10g00255 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
Bma10g00255 281 Gene3D - 141 281 IPR039261 -
Bma10g00255 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01430 Bma10g00255 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01060 Bma-Chr6:47438991 Bma10g00255 Bma-Chr10:2354021 3.96E-62 dispersed
Bma10g00255 Bma-Chr10:2354021 Bma11g00894 Bma-Chr11:33971462 4.81E-11 dispersed
Bma07g00307 Bma-Chr7:3744683 Bma10g00255 Bma-Chr10:2354021 2.96E-150 transposed
Bma10g00255 Bma-Chr10:2354021 Bma04g01430 Bma-Chr4:49302727 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00255 K00326 - csv:101212569 477.248