Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00275 ATGGCCTACGCTTGTGCTTCTTCTGCCATTACGGCCGTGGCCATCTCTTCTTCTTCGTCTTCTTCCTCTACCAGTTCGCAGAGGGGCTGCGCTTTTCTGACGGGAAGCAAATTGAGAGTGAAGAAGGGGAAGGCTGTTTGCAACTCTGCTGCAGCGAGATCCGTCGCTGTCTGCGTGGCGGCCGACCCGGAGAGGCCGTTGTGGTTCCCTGGCAGCACCCCCCCTCCGTGGCTTGATGGCACTCTCCCCGGAGACTTTGGTTTTGATCCTCTTGGTCTAGCGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAAGCGGAGATAGTTCACTGCCGTTGGGCGATGTTAGGCGCCGCCGGTATTTTCATCCCGGAGTTTCTCACTAAGATCGGTGTTCTCAATACCCCATCGTGGTACACTGCCGGAGAGCTAAACTACTTCACCGACACGAACACTCTCTTTATAATCGAGCTCATTTTGATTGGATGGGCGGAGGGGAGAAGATGGGCCGACATCCTCAAGCCTGGAAGCGTCAACACCGACCCCATCTTCCCCAACAACAAGCTCACCGGCACTGACGTCGGCTACCCCGGCGGCCTCTGGTTCGACCCTCTCGGGTGGGGATCTGGATCGCCAGAGAAGATCAAGGAGTTAAGAACCAAGGAGATCAAGAACGGTAGACTGGCCATGTTGGCCGTGATGGGGGCGTGGTTCCAACACATCTACACCGGAACTGGCCCTATCGACAACCTCTTCGCCCACCTTTCCGATCCCGGCCACGCCACCGTTTTCGCTGCTTTCACACCCAAGTGA 813 56.83 MAYACASSAITAVAISSSSSSSSTSSQRGCAFLTGSKLRVKKGKAVCNSAAARSVAVCVAADPERPLWFPGSTPPPWLDGTLPGDFGFDPLGLASDPESLRWNQQAEIVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELNYFTDTNTLFIIELILIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLSDPGHATVFAAFTPK 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2490354 2491419 - Bma003907.1 Bma10g00275 89338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00275 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Bma10g00275 270 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 270 - -
Bma10g00275 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Bma10g00275 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 270 IPR001344 GO:0009765|GO:0016020
Bma10g00275 270 SUPERFAMILY Chlorophyll a-b binding protein 59 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00227 Bma-Chr8:2793852 Bma10g00275 Bma-Chr10:2490354 4.61E-70 dispersed
Bma10g00226 Bma-Chr10:2039595 Bma10g00275 Bma-Chr10:2490354 2.51E-113 dispersed
Bma10g00275 Bma-Chr10:2490354 Bma12g00994 Bma-Chr12:42023138 1.35E-68 dispersed
Bma12g00374 Bma-Chr12:7192871 Bma10g00275 Bma-Chr10:2490354 9.44E-35 dispersed
Bma12g00392 Bma-Chr12:8244902 Bma10g00275 Bma-Chr10:2490354 5.90E-35 dispersed
Bma10g00275 Bma-Chr10:2490354 Bma04g01474 Bma-Chr4:50517231 4.38E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00275 K08908 - csv:101214055 469.159