Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00304 ATGGAAGATCAAATTGGAGACTATTACATTAGTGATAAAAATGTTAAAAGCATGAAGAATGTCTTGAGCTTGCCTGCAGACTGTGAATTACACAAAGCACTTGGTCCATCTTTTCGTGGACCCACCAATGATATTATGAGCTATTCTGCATACATGGGAAAGGATACCATTATGGAATTTAAATGTGATGATGATCCCGTTGATGGTAATGAAGCATCATGGTCTGAGAGAGAAACTGGGGCAGATCATCTACAGGAAGCTGTTGAAATGGAAAGATACAGCAATTCAGATGACACGTTATGGAGCAAATCAATCAGGGCTAAGTCTTCAACCTCAACAGTACAATTTTCAGCATCTGTTCTGCTGCATAATCAATCTGATTTGGATGTCTTAACAAGGGTTGATTCGTCTTGTGGAAGCCATCTCAATTCTGTAGGTTTTACAAGTGACAGAGATGCTTCTACTAATTCTTCTCTGTCAACGTCTCTCGTGGGAAGGCTGAGCAGCTTGAATGTGAATGAGCAGGGGGAAAATGGCAGTTGTAAAACCCAACTGAGAAAAGGTCTAAAATTTTCCACTAGAAGCAGAAGAAGGGGCAAGCTTGGTGACCATCAAAGACCGAGGCCAAGAGACAGACAACTGATACAGGATAGGCTCAAGGAGCTGCGGGAACTTGTTCCCAATGGTGCCAAGTGTAGCATTGACGGGCTGTTAGATCGAACAGTGAAGCACATGCTATATTTGAGAGGCATTACAGAGCAAGCAAATAAATTAAAGCAACTGGTATCCTATCGGAAGAATTGCAAATCTCCTGAGACAAAGGATGGCTTGAAAAATGGAGCGTGCTGGGCATTTGAATTTTTAATTGAACCCCAAGTATGCCCCATAATTGTGGAGGATCTAGATCTCCCAGGACACATGCTCATAGAGATGCTGTGTAATGACGGGGGACTCTTCCTAGAAATTGCTCAAGTGATTCGACGCTTGGACTTGACAATCTTAAAGGGCATGGTTGAATGTCATTCGGATAATAGTTGGGCCAGTTTTATCGTTGAGGGTTCAAGGGGATTCCACAGGATGGATGTTTTCTGGCCTCTGATGCATCTTTTACAACGTAAAAGAAATCCCATCTCAAGCAAGATTTGA 1146 42.32 MEDQIGDYYISDKNVKSMKNVLSLPADCELHKALGPSFRGPTNDIMSYSAYMGKDTIMEFKCDDDPVDGNEASWSERETGADHLQEAVEMERYSNSDDTLWSKSIRAKSSTSTVQFSASVLLHNQSDLDVLTRVDSSCGSHLNSVGFTSDRDASTNSSLSTSLVGRLSSLNVNEQGENGSCKTQLRKGLKFSTRSRRRGKLGDHQRPRPRDRQLIQDRLKELRELVPNGAKCSIDGLLDRTVKHMLYLRGITEQANKLKQLVSYRKNCKSPETKDGLKNGACWAFEFLIEPQVCPIIVEDLDLPGHMLIEMLCNDGGLFLEIAQVIRRLDLTILKGMVECHSDNSWASFIVEGSRGFHRMDVFWPLMHLLQRKRNPISSKI 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2766695 2768360 - Bma003938.1 Bma10g00304 89367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00304 381 MobiDBLite consensus disorder prediction 174 212 - -
Bma10g00304 381 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 199 248 IPR011598 GO:0046983
Bma10g00304 381 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 12 381 - -
Bma10g00304 381 CDD ACT_UUR-ACR-like 308 356 - -
Bma10g00304 381 MobiDBLite consensus disorder prediction 174 188 - -
Bma10g00304 381 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 12 381 IPR043561 GO:0003700|GO:0006355
Bma10g00304 381 MobiDBLite consensus disorder prediction 189 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00601 Bma-Chr9:43192545 Bma10g00304 Bma-Chr10:2766695 2.04E-49 dispersed
Bma10g00304 Bma-Chr10:2766695 Bma14g00384 Bma-Chr14:4596578 3.88E-56 dispersed
Bma10g00304 Bma-Chr10:2766695 Bma07g00206 Bma-Chr7:2509222 1.90E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00304 - - vvi:100249509 336.65