Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00319 ATGCTTGCTTCCATGGACTTAAATGCTTCTCCAGTACCTGAAGAGGACGAGGAAAATTACGAGAGGCGTGTAGAAGAATATAGTGCGCCGGAAGACCGGGTAGAAACTGCAGTTGATATAGCACGCAGGGAGCGAGACGAAAGACGTAAAAAGTTAAAACGAGAACGCCCAGATGAGAAACCAATGCATGTATCTCAACCATACGTTCATGATTCGTTTTATCAAATGAAAAGCCTGAAGTCTCATGATAGAAACAGACTTCCTCCAGGGTGGTTGGATTGTCCTCCATATGGTAGTGAAATATCTTTCATTATTCCTTCTAAGGTTCCACTTGATGAAACTTTCAATGACCAGATAGCTCCGGGTAAAAGATACTCCTTTAAGCAAGTGATTCATCAACAAAGACTTGGTTTGGTGATAGATCTGACAAATACTTCTCGTTACTACACAACAGTAGAATTGAAGAAAGAGGGTATCAAGCATGTTAAGATCCCATGCAAAGGAAGGGATTCTGTACCTGACAATGCCTCAGTTAATCAATTTGTCTATGAGGTCATTCAATTTTTTTTCCGCCAAAAACAGTCAAAGAAGTATATCCTTGTACATTGCACTCATGGGCATAATCGAACAGGATATATGATTATTCATTATCTTATGCGCACTATGTCTATTCCTGTCACTCAGGCAATAAAAGTATTTTCTGATGCTCGCCCTCCTGGAATCTACAAGCCTGACTATATAGATGCTCTGTATGCCTTTTATCATGAAAGAAAGCCCGAAATAGTTGTCTGTCCCCAAACACCTGAGTGGAAAAGATCCTCTGAGCTTGATCTTAATGGTGAAGCATTGCCAGATGATGATGATGATGGAGTTTCCGCTGCTCCATTACATGATAATGATGACCATGTGGTGATGACAAACGATGATGTTTTGGGAGATGAAATACCTAGGGAGCAACAAGATGCCTTTCGACTCTTCTGCTATCAAATGCTTAAGTTGGGTATTGGGGCAAGAGGAAATTCTCAATTTCCTGGGTCACACCCAGTTTCTCTCAACAGGGATAATTTACAATTGTTAAGGCAGCGTTATTATTATGCCACATGGAAAGCTGATGGAACACGATATATGATGCTAATTACTATGGATGGGTGTTACTTGGTTGATAGGAATTTCAATTTCCGCAGGGTGCAAATGAGGTTTCCCTGCAGAAACATAAATGATGGTCTTGTAGAGAGAACTCATCATTATACATTGCTTGATGGGGAGATGATAATTGATACTGTGCCAGGCACACAGAAGCAAGAGAGAAGATATCTCATCTATGATCTCATGGCAATTAACAACATCTCTGTTATTGAGCGACCTTTCTATGAAAGATGGAAAATGCTCGAGAAGGAAGTGATTGAACCTCGTAACTCTGAGCGCCAGAAGATTTACCATTACAGATATGATCTGGAGCCATTCAGGGTAAGGAGGAAAGATTTTTGGTTGCTCTCTGCTGTTAACAAGGTTCTAAAGGAATTCATTCCGAAGCTTTCACATGAAGCGGATGGACTAATTTTCCAGGGTTGGGATGATCCCTATATTCCTCGCACACACGAAGGTCTTTTGAAATGGAAGTATGCACAATTGAACTCCGTTGACTTCCTATTCGAGATGGTTGACGATGAGAGCCAGCATCTTTTTCTCTATGAACGAGGAAAGAAGAAACTTATGGAAGGGAATAGAGTTGTATTTAGAGATGGTTCAGATCCCTCTTTTTATTCTGGGAAGATAATAGAGTGCACTTGGGATTCTGACCAACAGCAATGGGACTGTATGCGAATCAGGACCGATAAATCAACTCCAAATGATATCAATACATATAGAAAGGTGATGCGAAGCATAAAAGACAATATCACTGAGGATATCTTGTTGAATGAGATTGATGAGATTATTCGTCTGCCCATGTATGCTGACAGGATAAAGATTGATAGTAAAGCACACCAGCACATAAATCGACGGAGATGA 2010 40.5 MLASMDLNASPVPEEDEENYERRVEEYSAPEDRVETAVDIARRERDERRKKLKRERPDEKPMHVSQPYVHDSFYQMKSLKSHDRNRLPPGWLDCPPYGSEISFIIPSKVPLDETFNDQIAPGKRYSFKQVIHQQRLGLVIDLTNTSRYYTTVELKKEGIKHVKIPCKGRDSVPDNASVNQFVYEVIQFFFRQKQSKKYILVHCTHGHNRTGYMIIHYLMRTMSIPVTQAIKVFSDARPPGIYKPDYIDALYAFYHERKPEIVVCPQTPEWKRSSELDLNGEALPDDDDDGVSAAPLHDNDDHVVMTNDDVLGDEIPREQQDAFRLFCYQMLKLGIGARGNSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLVDRNFNFRRVQMRFPCRNINDGLVERTHHYTLLDGEMIIDTVPGTQKQERRYLIYDLMAINNISVIERPFYERWKMLEKEVIEPRNSERQKIYHYRYDLEPFRVRRKDFWLLSAVNKVLKEFIPKLSHEADGLIFQGWDDPYIPRTHEGLLKWKYAQLNSVDFLFEMVDDESQHLFLYERGKKKLMEGNRVVFRDGSDPSFYSGKIIECTWDSDQQQWDCMRIRTDKSTPNDINTYRKVMRSIKDNITEDILLNEIDEIIRLPMYADRIKIDSKAHQHINRRR 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2925244 2932224 + Bma003957.1 Bma10g00319 89382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00319 669 Gene3D Protein tyrosine phosphatase superfamily 83 290 IPR029021 -
Bma10g00319 669 SMART dsp_5 110 256 IPR020422 GO:0006470|GO:0008138
Bma10g00319 669 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 179 248 IPR000387 GO:0016311|GO:0016791
Bma10g00319 669 Pfam mRNA capping enzyme, C-terminal domain 545 638 IPR013846 -
Bma10g00319 669 ProSitePatterns Tyrosine specific protein phosphatases active site. 201 211 IPR016130 GO:0016311|GO:0016791
Bma10g00319 669 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 668 - -
Bma10g00319 669 CDD Adenylation_mRNA_capping 318 541 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bma10g00319 669 Pfam mRNA capping enzyme, catalytic domain 347 540 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bma10g00319 669 PIRSF mRNA_capping_HCE 73 669 IPR017074 GO:0004484|GO:0006370|GO:0140818
Bma10g00319 669 MobiDBLite consensus disorder prediction 15 64 - -
Bma10g00319 669 ProSiteProfiles Dual specificity protein phosphatase domain profile. 105 260 IPR020422 GO:0006470|GO:0008138
Bma10g00319 669 CDD RNA_5'-triphosphatase 90 251 - -
Bma10g00319 669 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 307 541 - -
Bma10g00319 669 Gene3D - 580 648 IPR012340 -
Bma10g00319 669 SUPERFAMILY Nucleic acid-binding proteins 543 655 IPR012340 -
Bma10g00319 669 Gene3D DNA ligase/mRNA capping enzyme 299 540 - -
Bma10g00319 669 MobiDBLite consensus disorder prediction 1 64 - -
Bma10g00319 669 PANTHER MRNA-CAPPING ENZYME 3 668 - -
Bma10g00319 669 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 271 IPR029021 -
Bma10g00319 669 Pfam Dual specificity phosphatase, catalytic domain 128 254 IPR000340 GO:0008138|GO:0016311
Bma10g00319 669 ProSiteProfiles ATP-dependent DNA ligase family profile. 438 569 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00319 K13917 - qsu:112006691 1057.74