Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00326 ATGGTTGAAGAAAGAGATCTGAAGAGGGGTTTGACTGCATATACATATGGGTTCTTGTTGCCTGAGAAAGCTAAGTTTTTGCAGAAGAAAAAATGGCGCAATCGAAGAACAGGGATTGTTGCCAACAATGTAAAGCTGTTTTCTTATAACTCATTGAGATCGGCCACCGGAGATTTTCATCCGTCGAGCAGAATAGGTCGAGGAGGCTATGGAATTGTATACAAAGGAGTTCTTAGAGATGGTACTCAAGTAGCCATTAAATCCCTCTCCGCCCAATCGAAGCAAGGGTTCCATGAATTTTTGACGGAAATAAACATGATTTCCAACATTCGACATCCAAACCTCGTTCAATTGATCGGCTGTTGCGTCGAAGACAGTTGCCGGATACTGGTTTACGAGTATTTGGAGAACAACAGCCTTGCAAGTGTCTTGCTCGATTCGAAAATGAATCGAGTTGCTCTGGATTGGCGTAAGAGAGCTGGAATTTGCAAGGGAACAGCCGCGGCCCTTGCATTTCTCCACGAAGAAGCCGACCCAAATATCGTCCATAGAGATATTAAGGCTAGCAATGTTCTTCTCGATGGAGCCTTTCGTCCGAAAATAGGCGATTTTGGGCTGGCCAAGCTTTTTCCCGACAATGTCACGCATGTTAGCACTCGAGTCGCCGGAACTGTTGGATATCTGGCTCCAGAGTATGCACTTCTAGGACAGCTTACCAAGAAGGCGGATGTGTATAGTTTTGGAGTGCTCTTGCTGGAAATAATCAGTGGCAGAAGCAGCAGCAAGGCAGCGTTTGGAGATGAGCATCTGCTTCTAGTGGAATGGGCTTGGAAACTGAGAGGAGACGAAAGGCTAGCCGAAATCGTGGACAAAGAACTGGTGGACTATCCGAAATCGGAGGTGATTCGGTTCATCAAGGTGGGTCTCTTCTGCACCCAAGCTGCTGCCAACCAAAGGCCGACCATGAAGCAAGTTGTGCAAATGCTGGAAAAACAAGTCAGTCTTAACGAAAGGGTTCTGACAGAGCCGGGTGTTTTGAGGTCAAACACTTCCCGTTCTGGTAGCCGGCCTATTTCAGGCGGGGCAGCATATTCCGATGAACAGAAATGTAGGCCACCATTAGTGAATAATTCTATTAATTCAATGCCGTGTAGTGGCTTTCAATGTGTGACAGAGATGCTTCCTAGATGA 1191 46.52 MVEERDLKRGLTAYTYGFLLPEKAKFLQKKKWRNRRTGIVANNVKLFSYNSLRSATGDFHPSSRIGRGGYGIVYKGVLRDGTQVAIKSLSAQSKQGFHEFLTEINMISNIRHPNLVQLIGCCVEDSCRILVYEYLENNSLASVLLDSKMNRVALDWRKRAGICKGTAAALAFLHEEADPNIVHRDIKASNVLLDGAFRPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDEHLLLVEWAWKLRGDERLAEIVDKELVDYPKSEVIRFIKVGLFCTQAAANQRPTMKQVVQMLEKQVSLNERVLTEPGVLRSNTSRSGSRPISGGAAYSDEQKCRPPLVNNSINSMPCSGFQCVTEMLPR 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3002364 3004054 - Bma003966.1 Bma10g00326 89389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00326 396 SUPERFAMILY Protein kinase-like (PK-like) 36 330 IPR011009 -
Bma10g00326 396 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 356 - -
Bma10g00326 396 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 39 356 - -
Bma10g00326 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Bma10g00326 396 ProSiteProfiles Protein kinase domain profile. 59 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00326 396 CDD STKc_IRAK 65 331 - -
Bma10g00326 396 Gene3D Phosphorylase Kinase; domain 1 22 134 - -
Bma10g00326 396 Pfam Protein tyrosine and serine/threonine kinase 63 329 IPR001245 GO:0004672|GO:0006468
Bma10g00326 396 SMART serkin_6 59 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00326 396 Gene3D Transferase(Phosphotransferase) domain 1 135 341 - -
Bma10g00326 396 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Bma10g00326 396 MobiDBLite consensus disorder prediction 346 367 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01812 Bma10g00326 CCT
Bma01g01812 Bma10g00326 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00326 Bma-Chr10:3002364 Bma10g00476 Bma-Chr10:5478334 2.26E-113 dispersed
Bma07g00370 Bma-Chr7:4624723 Bma10g00326 Bma-Chr10:3002364 3.86E-140 transposed
Bma01g01812 Bma-Chr1:64243745 Bma10g00326 Bma-Chr10:3002364 4.69E-173 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66723 PF07714 PK_Tyr_Ser-Thr 1.00E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00326 - - cpap:110807720 505.368