Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00349 ATGGGAGCTTGGTGCACTAAAGACGTCGTCAATGGACGAGGGTATTCGAAAGACGAAGAAATGGGTTTCGAAGAAGATGATGCAGAGATGCAGAAAGGGGATGGGTGTTCTACTGTTAGATTACAGGGATCTTCTTCTTTTATCTCCATGTATACCCAGCAAGGAAGAAAAGGAATCAACCAAGACGCCATTACTGTTTGGGAGAACTTCACCGGGGAAGATGATATGTTCTTTTGTGGGGTGTTCGATGGCCATGGTCCGTACGGCCATCACGTAGCCCGCCATGCGAGGAACAACTTACCCTTGAAGGTCTCCAAAGCGATGCAGCTCTTCCCTGTGAAACATCTTGAAGATAGCGATGGCAATGGCACCAATCCCTTCTTTTCTTCTTCAGAAGCCATTCTCCACCAATCTTTCAAGGAACTGGACGATGAACTCGGACGAGACTCTACCGTTGATTGCTTCTGTAGTGGCACTACAGCTGTTACAGTTATCAAACAGGGGAACCGTTTGATCATAGCCAACTTGGGGGATTCTCGTGCAGTTCTTGGCAGCAGAGGAAACAAAAATAAACTCTTTGCTCGGCAACTAACTGTTGATTTGAAACCAGATGTTCCAAGTGAAGCAGAAAGAATCAAGAACTGCAGAGGCAGGATCTTCTCCGTCAAAGACGAGCCAGGCGTTTACAGAATCTGGATGCCAGACGAAGACTGTCCTGGTCTAGCCATGGCTAGAGCATTTGGAGATTTCTGCGTCAAAGATTATGGCCTCATCGCCACTCCTCAAGTTCACTACAGAACACTTACAGACAAAGACGAATTTGTAGTCTTAGCGACTGACGGAATATGGGACGTGTTTTCAAATGCTGAAGCAATTCGCATTGTTGCGTCTGCAAAGAAGCGATCGAAGGCGGCCAAGTTGCTGGTGAGCAGAGCAGTATCGGCGTGGAAGAGCAATTATCCAGGCTCAAAGATTGATGATTGTGGCGTAATCTGTTTGTTTCTCACAAACCCACCGCCGTCGACGGAACATTCTGGCGATCTGAGACCGCCGGCAGCTATATCGATTTCGCGCAGCTTCGCTCGAGGTTCTGAACGAGAGACAGCGGGCGGCAGCAGAGGAGGCGGCGGCGGAGGAGCCAGAACAGGAAAAGAGTGGAGTGCTCTGGAAGGACTGAGCAGAGTCAACTCTCTCCTCCGCCTTCCACGGTTTGCCCGCGCTCTTAGCCGCCGGAAAATTGAGAAGGTCAATGAACAACCGCAATCGCACTGA 1272 49.45 MGAWCTKDVVNGRGYSKDEEMGFEEDDAEMQKGDGCSTVRLQGSSSFISMYTQQGRKGINQDAITVWENFTGEDDMFFCGVFDGHGPYGHHVARHARNNLPLKVSKAMQLFPVKHLEDSDGNGTNPFFSSSEAILHQSFKELDDELGRDSTVDCFCSGTTAVTVIKQGNRLIIANLGDSRAVLGSRGNKNKLFARQLTVDLKPDVPSEAERIKNCRGRIFSVKDEPGVYRIWMPDEDCPGLAMARAFGDFCVKDYGLIATPQVHYRTLTDKDEFVVLATDGIWDVFSNAEAIRIVASAKKRSKAAKLLVSRAVSAWKSNYPGSKIDDCGVICLFLTNPPPSTEHSGDLRPPAAISISRSFARGSERETAGGSRGGGGGGARTGKEWSALEGLSRVNSLLRLPRFARALSRRKIEKVNEQPQSH 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3270955 3272880 - Bma003990.1 Bma10g00349 89412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00349 423 MobiDBLite consensus disorder prediction 360 385 - -
Bma10g00349 423 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 399 - -
Bma10g00349 423 SMART PP2C_4 37 333 IPR001932 -
Bma10g00349 423 Pfam Protein phosphatase 2C 62 313 IPR001932 -
Bma10g00349 423 PANTHER ALPHABET, ISOFORM E-RELATED 1 399 - -
Bma10g00349 423 ProSiteProfiles PPM-type phosphatase domain profile. 47 335 IPR001932 -
Bma10g00349 423 SUPERFAMILY PP2C-like 41 338 IPR036457 -
Bma10g00349 423 CDD PP2Cc 47 335 IPR001932 -
Bma10g00349 423 Gene3D - 37 337 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00349 Bma-Chr10:3270955 Bma13g00328 Bma-Chr13:5872581 3.79E-130 dispersed
Bma10g00349 Bma-Chr10:3270955 Bma13g00370 Bma-Chr13:6866969 3.37E-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00349 - - mnt:21397155 456.447