Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00355 ATGAGTTGCAGCGAGACCGGCGGAGGAATACAAGAGAGAGAACAAGCACATGTGGTTTTGCGGAGGTCTGTTGACTTAGAACGAAAATCTGTCTCCCGTAATGGATTGGGGACAGCCACACAGACAACAATTGATGAGAATCTTCTTGTCGATCCCAAATTACTGTTTATTGGATCTAAGGTTGGTGAGGGAGCTCATGGAAAAGTTTATGAAGGAAGGTATGGGAATCAAATAGTTGCGATCAAAGTTCTCAATCGTGGGAATACGGCAGAGGAAAGAGCTTCTCTTGAGAATCGTTTCATTCGAGAAGTAAATATGATGACTCGTGTTAAACATGATAATCTGGTCAAATTTATTGGAGCATGTAAAGATCCATTAATGGTGATCGTGACGGAGCTCTTACCAGGAATGTCTTTGCGAAAGTATCTACTGACCATTCGACCAGAGCAGTTAGACCTTGATGTGGCTATTAGATATGCACTAGATATTGCTCGCGCTATGGAGTGTCTGCATGCAAATGGGATCATCCATAGAGATCTAAAACCTGATAATTTGCTGCTTACGGCCAATCACAGGTCCGTAAAGCTTGCAGACTTTGGCCTTGCAAGAGAAGAATCTGTGACTGAGATGATGACTGCAGAGACTGGGACTTATCGGTGGATGGCTCCCGAGTTATACAGTACAGTGACATTGCGTCAGGGAGAAAAGAAACATTACAATAACAAGGTAGACGTATACAGCTTCGGAATTGTCTTATGGGAACTCGTGACCAACCGCATGCCGTTTGAAGGCATGTCGAATTTGCAGGCCGCTTATGCTGCTGCATTTAAGCAGGAGAGGCCTAATCTTCCGGAGGACATGTCTGCTGATCTGGCATTCATCATACAATCATGTTGGGTCGAGGATTCTAACTCGAGGCCCAGCTTTGGCCAAATCATTCGCATGCTCAACGCATTTCTATTTACTCTCCCTCCCCCTTCGCCGTCAGCCGTCCCAGAATCTAACACCATCGAGGCACCAACAAGCAACGCTGCCATGACCGAGTTATCTGGTCGCATGAGGGGGAAGTTTGGTTTTCTACGTCAACTGTTTGCTGCAAAGAAGGGTAAGAACTCCGAATGA 1122 45.63 MSCSETGGGIQEREQAHVVLRRSVDLERKSVSRNGLGTATQTTIDENLLVDPKLLFIGSKVGEGAHGKVYEGRYGNQIVAIKVLNRGNTAEERASLENRFIREVNMMTRVKHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLLTIRPEQLDLDVAIRYALDIARAMECLHANGIIHRDLKPDNLLLTANHRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELVTNRMPFEGMSNLQAAYAAAFKQERPNLPEDMSADLAFIIQSCWVEDSNSRPSFGQIIRMLNAFLFTLPPPSPSAVPESNTIEAPTSNAAMTELSGRMRGKFGFLRQLFAAKKGKNSE 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3339143 3341459 + Bma003997.1 Bma10g00355 89418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00355 373 SUPERFAMILY Protein kinase-like (PK-like) 54 338 IPR011009 -
Bma10g00355 373 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Bma10g00355 373 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 22 349 - -
Bma10g00355 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Bma10g00355 373 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00355 373 Gene3D Transferase(Phosphotransferase) domain 1 138 336 - -
Bma10g00355 373 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00355 373 CDD STKc_MAP3K-like 61 316 - -
Bma10g00355 373 PANTHER SERINE-THREONINE PROTEIN KINASE 22 349 - -
Bma10g00355 373 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Bma10g00355 373 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00355 Bma-Chr10:3339143 Bma14g01476 Bma-Chr14:29907285 1.32E-144 dispersed
Bma10g00355 Bma-Chr10:3339143 Bma07g00631 Bma-Chr7:10046470 7.98E-78 transposed
Bma10g00355 Bma-Chr10:3339143 Bma11g00795 Bma-Chr11:23180689 1.27E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66725 PF07714 PK_Tyr_Ser-Thr 2.10E-59 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00355 - - pvy:116122941 603.979