Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00363 | ATGGGCAACTGTGGGACTAGAGAAGAATCAGCTGTCGTTTCCAACGCTCAAGTTCAACGACTGCAAACAATATCTTCATCTTGGGCGATAAAAAACGCGAGCTCCAACTCCACTGACAAAAGGCATGATCATAATCGATCGGTATCAGATCTGAGTGACCCCTCCACCCCTTACAATTTTGAAGATTTTGGAAAGAATTCTCAGCTCTATACCCACATTATCGCATTTACATTGTATGAGCTTGAGACTATCACAAAAAGCTTCCGCTCCGACTACATTCTCGGCGAAGGCGGATTTGGAACTGTTTACAAAGGTTATATCGACGAGAATGTCCGAGTTGGCCTTAAATCTCTTCCCGTAGCCGTGAAAGTTCTCAACAAGGAAGGTCTTCAGGGCCATCGAGAATGGCTGACAGAAGTCAACTTTCTCGGGCAGCTGAGGCATCCAAATTTGGTTAAACTGATCGGCTACTGTTGCGAGGATGATCATAGGTTACTTGTCTATGAATTCATGTTTCGAGGAAGTCTTGAAAACCACCTCTTTCGAAAGGCGACTGTACCGTTGTTGTGGGCGACAAGAATGGCGATTGCTTTTGGAGCTGCCAAAGGACTTGCCTTTCTTCACAATGCCGAAAGGCCAGTTATCTATCGGGATTTCAAAACTTCTAATATATTACTCGACTCTGATTACGCAGCCAAGCTTTCTGATTTTGGGCTTGCAAAAGCCGGACCACAAGGTGACGAGACTCATGTGTCCACTCGAGTGATGGGTACCTATGGCTACGCCGCTCCTGAATATGTCATGACTGGCCACCTTACTGCAAAAAGTGATGTATACAGCTTCGGCGTTGTTCTTCTCGAACTTCTGACAGGGAGAAAATCGGTAGATAAGACTAAACCTAGCAAGGAGCAGAACTTAGTCGACTGGGCTCGACCGAAACTAAATGACAAGAGAAAATTCCTACAAATAATTGATCCGAGATTAGAGAATCAATACTCGGTGAGGGCAGCGCAGAAAGCCTGCAGCCTGGCTTATTACTGCCTGAGCCATAATCCAAAAGCAAGGCCGTTAATGAGCGATGTGGTCGAAACTTTGGAGCCTCTACAAAGTTGCAGTGAAGGCACAAACGAAGTCTTATCGACTGGAAGCGGGCCCTTTGCCCTGTCCACTGGTGGAATCGGAGATCAAAGGAGGCATCAGAGATTTGCCAACAATGTGCGTCCGGCGTGCCGGTCTCCAAACCCGAATTGCTCCCCCGGTGGCCTTGCAGCCTGCCGGGTTAGGTGA | 1287 | 47.32 | MGNCGTREESAVVSNAQVQRLQTISSSWAIKNASSNSTDKRHDHNRSVSDLSDPSTPYNFEDFGKNSQLYTHIIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLLWATRMAIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYAAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGRKSVDKTKPSKEQNLVDWARPKLNDKRKFLQIIDPRLENQYSVRAAQKACSLAYYCLSHNPKARPLMSDVVETLEPLQSCSEGTNEVLSTGSGPFALSTGGIGDQRRHQRFANNVRPACRSPNPNCSPGGLAACRVR | 428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3425549 | 3428109 | + | Bma004005.1 | Bma10g00363 | 89426 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00363 | 428 | ProSitePatterns | Protein kinases ATP-binding region signature. | 94 | 123 | IPR017441 | GO:0005524 | |
Bma10g00363 | 428 | Pfam | Protein tyrosine and serine/threonine kinase | 93 | 365 | IPR001245 | GO:0004672|GO:0006468 | |
Bma10g00363 | 428 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED | 29 | 415 | - | - | |
Bma10g00363 | 428 | ProSiteProfiles | Protein kinase domain profile. | 88 | 369 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma10g00363 | 428 | Gene3D | Transferase(Phosphotransferase) domain 1 | 171 | 381 | - | - | |
Bma10g00363 | 428 | CDD | STKc_IRAK | 94 | 368 | - | - | |
Bma10g00363 | 428 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 170 | - | - | |
Bma10g00363 | 428 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 214 | 226 | IPR008271 | GO:0004672|GO:0006468 | |
Bma10g00363 | 428 | MobiDBLite | consensus disorder prediction | 34 | 53 | - | - | |
Bma10g00363 | 428 | PANTHER | OS01G0588500 PROTEIN-RELATED | 29 | 415 | - | - | |
Bma10g00363 | 428 | SUPERFAMILY | Protein kinase-like (PK-like) | 66 | 366 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00572 | Bma-Chr7:7966617 | Bma10g00363 | Bma-Chr10:3425549 | 1.09E-160 | dispersed | |
Bma07g01363 | Bma-Chr7:49264505 | Bma10g00363 | Bma-Chr10:3425549 | 1.50E-153 | dispersed | |
Bma10g00363 | Bma-Chr10:3425549 | Bma11g00612 | Bma-Chr11:9251429 | 8.95E-161 | dispersed | |
Bma03g00073 | Bma-Chr3:583538 | Bma10g00363 | Bma-Chr10:3425549 | 4.29E-106 | transposed | |
Bma11g00759 | Bma-Chr11:20158084 | Bma10g00363 | Bma-Chr10:3425549 | 4.70E-149 | transposed | |
Bma10g00363 | Bma-Chr10:3425549 | Bma04g01242 | Bma-Chr4:36845565 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66727 | PF07714 | PK_Tyr_Ser-Thr | 6.50E-48 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00363 | - | - | csv:101220268 | 743.036 |