Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00447 ATGGTTTTTTTAATATTTTTTTCAGAATTGCCGGGCATTCATGGCGTTAATTTGTACATGTACAAAGAGCTAAGAACAGCAACAGAAGATTTTAGTCCAGTAAATAAAATTGGAGAGGGTGGTTTCGGCTCTGTCTATAAGGCCAAGTTAAAACACGGGAAGATCGCTGCCATAAAGGTTCTTTCAACTGAATCGAAGCAAGGGTTGAGAGAATTTTTGACAGAGATTACCGTCATCTCAGAGATACAGCACGAGAACTTGGTCGAGCTCTATGGCTGTTGTGTGGAGGGAAATCACAGAATCTTAGTCTACAACTACCTCGAAAATAACAGCCTTGCCCAAACTCTCCTCGGAAAAGGCGACAGTAACATCAACTTCGACTGGCGAACAAGGACTAATATTTGCATTGGAATTGCTCGAGGGCTGGCCTTTCTTCACGAGGAAGTTCGACCACATATCATTCATAGAGACATCAAAGCAAGTAACATTTTGCTGGATGGAAATTTAACGCCTAAGATATCAGATTTTGGTCTCGCAAAACTTATCCCTCCGAGCATTACTCATGTCAGCACCCGTGTTGCAGGAACGATTGGATATCTAGCGCCAGAATATGCAATACGAGGACAAGTAACGAGGAAATCCGATATCTACAGTTTCGGCGTCCTCCTCGTGGAAATAGTCAGCGGAAGGTGTAACACTAATACACAGCTCCCGGTAGGCGAACAGTATCTTCTAGAAAGGACATGGGGTCTTTTCGAGAAGCAAGACAGTCCACGGCTCCGACCGGCAATGTCGATCGTCGTAAAGATGCTGAGAGGAGATATCCAGGTCGACGACAACAAGATAACAAAACCCGGGTTGATTTCTGATTTTATGGACCTTAAAGTTACGCATCCGACTAAAAAGCAGCCGAAAAAACCGATTCTTTCCACCTACGAAGAAGCTTCTTCTGGGTCTGATTATCTAGACGGCTCTACCTTGTCATCTGGAACTTCTACTCTTCCAAATTCCACTTTTACTGTAAAATATGATCCCAGTTTTTGA 1044 43.39 MVFLIFFSELPGIHGVNLYMYKELRTATEDFSPVNKIGEGGFGSVYKAKLKHGKIAAIKVLSTESKQGLREFLTEITVISEIQHENLVELYGCCVEGNHRILVYNYLENNSLAQTLLGKGDSNINFDWRTRTNICIGIARGLAFLHEEVRPHIIHRDIKASNILLDGNLTPKISDFGLAKLIPPSITHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTQLPVGEQYLLERTWGLFEKQDSPRLRPAMSIVVKMLRGDIQVDDNKITKPGLISDFMDLKVTHPTKKQPKKPILSTYEEASSGSDYLDGSTLSSGTSTLPNSTFTVKYDPSF 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5043720 5045954 - Bma004117.1 Bma10g00447 89510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00447 347 SMART serkin_6 31 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00447 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Bma10g00447 347 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 8 251 - -
Bma10g00447 347 ProSitePatterns Protein kinases ATP-binding region signature. 37 59 IPR017441 GO:0005524
Bma10g00447 347 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 255 331 - -
Bma10g00447 347 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 251 - -
Bma10g00447 347 Gene3D Phosphorylase Kinase; domain 1 13 106 - -
Bma10g00447 347 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 255 331 - -
Bma10g00447 347 SUPERFAMILY Protein kinase-like (PK-like) 13 271 IPR011009 -
Bma10g00447 347 Pfam Protein kinase domain 34 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00447 347 Gene3D Transferase(Phosphotransferase) domain 1 107 285 - -
Bma10g00447 347 ProSiteProfiles Protein kinase domain profile. 31 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00447 347 CDD STKc_IRAK 37 271 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00447 Bma13g00932 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00447 Bma-Chr10:5043720 Bma10g00476 Bma-Chr10:5478334 2.35E-144 dispersed
Bma10g00447 Bma-Chr10:5043720 Bma13g00895 Bma-Chr13:38913506 0 wgd
Bma10g00447 Bma-Chr10:5043720 Bma13g00932 Bma-Chr13:39816946 1.59E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66729 PF00069 Pkinase 6.80E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00447 - - qsu:112027444 489.96