Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00457 ATGACTTCAGGAACGAGGCTACCAACATGGAGGGAAAGGGAAAACAACAAGAGAAGGGAGAGAAGGAGGAGAGCTATAGCGGCGAAGATCTTCACTGGTCTCAGAATGTACGGAAACTATAAGCTCCCGAAGCACTGCGATAACAATGAGGTCCTTAAAGCTCTCTGCGACGAGGCCGGTTGGACCGTTGAATCCGACGGCACCACCTACCGTAAGGGATTTAAACCTGTTGAAAGAATAGATCTTGTTGGTGGGTTGCCAGCGGCTGCCTCCTCATCTCAGCATCACAGTCCATATGCTTCCTTCATTCCGAGCCCCAGTTCTTCCTCTTTTCCTAGTCCAGTCTCATCTTCGTATACTGCTGCTAATCCTACAACGGATGGAAATTCCCTCATCCCTTGGCTCAAAAATCTTTCATCTGCCTCATCATCAGCCTCCTCTTCCAAGCGCCCCCACCTCTATATCCATGGAGGCTCTGTCAGTGCTCCAGTTACCCCACCTTTGAGCTCACCAAGTGCCAAAACACCCCGAATTAGAGCCAATTGGGAAGAACAAACAGCATCCCCTGGTTGGACTGCTCAACAATACTCGATCCTACCATCTTCTACTCTACCAAGCCCTCCGTCTTCTACTCCACCAAGCCCTGGCCGCCAGATTTTTCCGGATCCAGAATGGTTTTCTGGAATTAGAATTCCTTACAGTGGACCAACTTCTCCAACGTTCAGCCTTGTCTCTTCTAACCCATTTGGCTTTAAGGAAGAGGCGTTAACTGGTGGTGGATCGCGTATGTGGACTCCCGGGCAAAGTGGGACATGCTCTCCGGCCATTGCAGCAGGCTCTGATCACACTGCAGACATTCCGATGTCTGAACTTATTTCAGATGAGTTTGCATTTGGAAGCAATGCAGCTGGAATCGTTAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATTCTGGATCAGATGATCTCGAGCTGACCCTTGGGAGTTCAAGGACAAGGTGA 1002 49.8 MTSGTRLPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVESDGTTYRKGFKPVERIDLVGGLPAAASSSQHHSPYASFIPSPSSSSFPSPVSSSYTAANPTTDGNSLIPWLKNLSSASSSASSSKRPHLYIHGGSVSAPVTPPLSSPSAKTPRIRANWEEQTASPGWTAQQYSILPSSTLPSPPSSTPPSPGRQIFPDPEWFSGIRIPYSGPTSPTFSLVSSNPFGFKEEALTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSELISDEFAFGSNAAGIVKPWEGERIHEDSGSDDLELTLGSSRTR 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5150979 5154187 + Bma004128.1 Bma10g00457 89520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00457 333 MobiDBLite consensus disorder prediction 157 177 - -
Bma10g00457 333 MobiDBLite consensus disorder prediction 163 177 - -
Bma10g00457 333 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 207 IPR033264 GO:0003700|GO:0006351|GO:0009742
Bma10g00457 333 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 207 - -
Bma10g00457 333 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 208 333 - -
Bma10g00457 333 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Bma10g00457 333 MobiDBLite consensus disorder prediction 1 21 - -
Bma10g00457 333 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 208 333 IPR033264 GO:0003700|GO:0006351|GO:0009742
Bma10g00457 333 MobiDBLite consensus disorder prediction 198 219 - -
Bma10g00457 333 MobiDBLite consensus disorder prediction 313 333 - -
Bma10g00457 333 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00457 Bma-Chr10:5150979 Bma14g00977 Bma-Chr14:11391587 3.35E-133 dispersed
Bma10g01198 Bma-Chr10:42537550 Bma10g00457 Bma-Chr10:5150979 0 transposed
Bma10g00457 Bma-Chr10:5150979 Bma13g00924 Bma-Chr13:39682631 7.22E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57928 PF05687 BES1_N 1.60E-59 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00457 - - tcc:18594295 512.686