Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00460 ATGTTTGATCATTACAGGGTGCTCCAAGCTAGTGGACTTACAGGGCCAATTCCTTCTGGCATATCACTTTTGAGCAATGTGACTGATTTGAGGATCAGCGACTTAACTGGATCTCCGGCGCCTTTTCCTCCCATTAGTAATATGACGAAATTGAAAGTACTCATATTAAGAAGCTGCAATATTACTGGAAGGCTGCCCGATTATCTGGTGACTATGGGAGGAACATTGAAAACCCTAGACCTTAGCTTTAACGAGCTACAAGGGCCAATTCCTACCGGCTATGATGCTCTTCAAAAAGTAGATAATGTGATTTTAACTGGAAACATGCTCAATGGATCAGTGCCTGATTGGATGCTCCAAGGAAGTACAGATAGCTTTGATATCTCATATAACAACTTCTCTATAGGCAACAATAGATCCTCAAGCTGCCAACAACAAAATGTGAATGTATTTGCAGCTACAGCAAAAGGAAATAGTTCTGGAATTGTTTCGTGCTTGGGGAAAGACCATTGTGCACAAACTAGTTATTCACTGCGTGTAAATTGTGGTGGAAAGGAAACAACAATCAATGGAACGAAAATTTTTGGCGACGATACAAGTGATGTTAGATCATCAAGGTTTGTCGAAAGTAGATACAACAATTGGGGAATTAGTAATACGGGTATCTTCATGGATGATGACCGCCCATCTGACACCTACATTTGGGCAAACTCATCTGCGCTCTCAATGACAACCAATCCTGAAATATATACAACTGCTCGGCTCTCTGCACTCTCTCTTACTTATTATGGGTATTGTCTTGGAAATGGATCCTACACTGTTCACCTCCACTTTGCAGAGATAATGTTTACTAATGATAAGACATTTAGCAATCTTGGTAGGCGCATATTTGATGTTTACATTCAGGGAAAGCTGGTGCTGGAGAATTTTGATATTGCAAGAGAAGCAGGTGGGGTTGGCATGGCTGTGGTGAAAAGTTTTCCCGTCAATATTACAGATGGTACCTTGGAAATTCGTTTCTATTGGGCGGGAAAGGGGACAAATGCTATTCCAGTAAGAGGAGTCTATGGCCCTCTAATTTCAGCCATTTCCGTAGATCCTGACTTTGAGCCTCCAGCGCAAGCAGGAGTAGATACCAGTAGCATGGCAGCCGGGGTTGTTGTTGGAATTGTAGCTGCAGTGTTAGTCATGATATTGCTGATTCTAGGAATCTTGTGGTGGAAAGGCTGTATTGGCAAGAAAAAAACAATGGACGAAGATCTAAGAGGTTTAGATCTTCAAACTGGTTCATTTACCTTGCGGCAAATACGAGCTGCCACTAACAACTTTGATTCAGCTTATAAGATTGGCGAGGGTGGTTTTGGTCCTGTTTACAAGGGTCTTCTAGCAGACGGGACCATAATAGCAGTGAAACAGCTTTCTTCAAAATCAAAGCAAGGAAATCGAGAGTTTATTAATGAGATTGGCATGATATCTGCTCTGCAGCACCCAAATCTCGTTAAGCTTTATGGATGTTGCATTGAAGGAAATCAATTACTGTTAATATACGAGTACTTGGAGAATAACAGCCTTGCTCGAGCTCTATTCGGCTCTGAAGAACACCAAATGAAACTGGATTGGCGGACAAGATACAATATTTGTATTGGTATTGCAAGAGGGTTGGCTTATCTTCATGAAGAGTCGAGATTGAAGATCGTTCATCGAGACATTAAGGCAACCAATGTTTTGCTCGATAAAAATCTTGAACCAAAAATTTCTGACTTTGGATTGGCCAAGCTTGACGAAGAAGGAAATACACACATTAGCACTCGAGTCGCCGGAACCTTCGGATATATGGCACCGGAGTATGCAATGAGAGGCTATTTGACTGATAAAGCAGACGTGTATAGCTTTGGCATCGTGGCCCTGGAAATTGTCAGTGGAAGAAGCAACACAAGTTACCGGCCGAAAGAGGAATGCTTTTACCTTCTTGATTGGGCACTTATTTTAAAAGAGAAATCAAGTCTGCTTGACCTAGTCGACGCAAGATTAGGATCAGACTTCGATGAAAAAGAAGCAATGGTGATGATCAATCTGGGTCTCCAATGCGCCAACGTATCTCCGGCAGTGAGGCCATTGATGTCGAACGTTGTGAGCATGCTTGAAGGTAGAGTCCTTCCCAAGGAGACGGTTCCCGATCCCAATGCCTCAAAAGAAGCCATGAACGCAATGTGGAACCAGTATCAGCGCGAGAAAGAGAGTCGCACAAATGATAGTCAGAATCAGAGCATATCTTTGGATGCACCATGGACTAGTTCTTCAACATCTGCTGTAGATCTCTATCCAATCAACATGGATTCTGCCTACTTGAACAACCGCTAG 2361 42.57 MFDHYRVLQASGLTGPIPSGISLLSNVTDLRISDLTGSPAPFPPISNMTKLKVLILRSCNITGRLPDYLVTMGGTLKTLDLSFNELQGPIPTGYDALQKVDNVILTGNMLNGSVPDWMLQGSTDSFDISYNNFSIGNNRSSSCQQQNVNVFAATAKGNSSGIVSCLGKDHCAQTSYSLRVNCGGKETTINGTKIFGDDTSDVRSSRFVESRYNNWGISNTGIFMDDDRPSDTYIWANSSALSMTTNPEIYTTARLSALSLTYYGYCLGNGSYTVHLHFAEIMFTNDKTFSNLGRRIFDVYIQGKLVLENFDIAREAGGVGMAVVKSFPVNITDGTLEIRFYWAGKGTNAIPVRGVYGPLISAISVDPDFEPPAQAGVDTSSMAAGVVVGIVAAVLVMILLILGILWWKGCIGKKKTMDEDLRGLDLQTGSFTLRQIRAATNNFDSAYKIGEGGFGPVYKGLLADGTIIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFGSEEHQMKLDWRTRYNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLEPKISDFGLAKLDEEGNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSYRPKEECFYLLDWALILKEKSSLLDLVDARLGSDFDEKEAMVMINLGLQCANVSPAVRPLMSNVVSMLEGRVLPKETVPDPNASKEAMNAMWNQYQREKESRTNDSQNQSISLDAPWTSSSTSAVDLYPINMDSAYLNNR 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5186200 5244283 + Bma004131.1 Bma10g00460 89523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00460 786 SMART serkin_6 443 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00460 786 SUPERFAMILY L domain-like 8 135 - -
Bma10g00460 786 Pfam Protein tyrosine and serine/threonine kinase 447 713 IPR001245 GO:0004672|GO:0006468
Bma10g00460 786 Gene3D Phosphorylase Kinase; domain 1 411 518 - -
Bma10g00460 786 Gene3D - 177 367 - -
Bma10g00460 786 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 755 - -
Bma10g00460 786 Gene3D Transferase(Phosphotransferase) domain 1 519 724 - -
Bma10g00460 786 ProSiteProfiles Protein kinase domain profile. 443 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00460 786 Pfam Malectin domain 177 363 IPR021720 -
Bma10g00460 786 Gene3D Ribonuclease Inhibitor 4 176 IPR032675 -
Bma10g00460 786 SUPERFAMILY Protein kinase-like (PK-like) 427 740 IPR011009 -
Bma10g00460 786 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 755 - -
Bma10g00460 786 MobiDBLite consensus disorder prediction 742 765 - -
Bma10g00460 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Bma10g00460 786 CDD STKc_IRAK 449 716 - -
Bma10g00460 786 MobiDBLite consensus disorder prediction 751 765 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00532 Bma-Chr8:30994763 Bma10g00460 Bma-Chr10:5186200 0 dispersed
Bma10g00460 Bma-Chr10:5186200 Bma10g01197 Bma-Chr10:42494915 0 dispersed
Bma10g00458 Bma-Chr10:5156089 Bma10g00460 Bma-Chr10:5186200 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66731 PF07714 PK_Tyr_Ser-Thr 5.90E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00460 - - jre:109011992 1041.57