Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00463 ATGAGTATCAGGAGATTATTGCTGCTGTTGAAACCGTTCGACGCTTACCCGGTCATTCGATCAGATTGTTCCTTTGGCGTCACCAATCCTCGGATGTTGCGTCATCTGGAAAATAGACAAAAGGCTCATCGTGATGCCGTGAACTTCTGTCAAGATATTTTGCGGCAAAAACCGCTTGATTGGAAACCTATATTCCGCAACAATCTTGCAGAGCCAATTCATAATGTGGACCTTGTTGTAACTATAGGAGGTGATGGCACTCTTTTGCAGGCTAGTCATTTCCTGGACGATTCGATTCCAGTACTAGAGTATAGCGATGAGTTTGATGCCAGTAGAAGCACAGGATATCTTTGCGGGGCAACTCTCGATACCTTTGAACACGTGTTGGATAATATTTGTTGTGGACAAAGAGTTTCAACTGCTGCCGGATCAACGGCTGCAATGCAGTCGGCAGGCGGTTTCCCTATGGACATATTATCTCAAGATCTACAATATATGGTAAGAGAACCTATTTCACTTGGAGAATCCTGTATTCCGATGCATGGATTAGTCAAATCTGATCACTCCATTCAAACTACCTGGTATTGTAAAGAGGGCGTAATTTTCGTTGACGGTTCTCATGTCTGCCATTCGATCAAGAACGGCGACATTGTCGAGATATCATCGAGGGCTCCACCATTGAAGGTTTTCTTGCCTCCCCATTTGTTGAATACAGTACAAGAGAGTAGCTGA 732 44.13 MSIRRLLLLLKPFDAYPVIRSDCSFGVTNPRMLRHLENRQKAHRDAVNFCQDILRQKPLDWKPIFRNNLAEPIHNVDLVVTIGGDGTLLQASHFLDDSIPVLEYSDEFDASRSTGYLCGATLDTFEHVLDNICCGQRVSTAAGSTAAMQSAGGFPMDILSQDLQYMVREPISLGESCIPMHGLVKSDHSIQTTWYCKEGVIFVDGSHVCHSIKNGDIVEISSRAPPLKVFLPPHLLNTVQESS 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5252464 5255001 - Bma004134.2 Bma10g00463 89526

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00463 243 PANTHER NAD KINASE 135 236 - -
Bma10g00463 243 PANTHER NAD KINASE 3 135 - -
Bma10g00463 243 Pfam ATP-NAD kinase N-terminal domain 71 102 IPR002504 GO:0003951|GO:0006741
Bma10g00463 243 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 59 231 IPR016064 -
Bma10g00463 243 PANTHER NADH KINASE 135 236 - -
Bma10g00463 243 PANTHER NADH KINASE 3 135 - -
Bma10g00463 243 Gene3D - 2 140 IPR017438 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00463 K00858 ppnK, NADK; NAD+ kinase [EC:2.7.1.23] - jre:109011807 273.092
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g30 . . . . . . Bma10g00463 . . Cmo04g00705 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda05g00813 . . . . . . . . Cma04g00656 . . . . Cpe01g00593 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010160 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 2 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma10g00463 Bma_Chr10 FPKM 5.208019 6.565341 13.466548 12.611725 37.90374 33.059525 39.117195 17.363497 18.396692 17.405703