Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00465 ATGGATTTTTTCACCGAGTATGGGGATGCCAACAGATATAAGATTCTCGAAATTATTGGAAAGGGTAGTTATGGAGTTGTTTGTGCAGCAATTGATACACATACTGGGGAAAAAGTGGCAATAAAGAAAATTCACGACATTTTTGAGCATATATCGGATGCCACTCGGATCCTCCGTGAAGTAAAGTTGCTGAGGCTTTTACGACATCCTGATATCGTTGAGATTAAGCGCATCATGTTGCCTCCTTCAAAGAGGGAGTTTAAAGATATTTTTGTTGTTTTTGAGCTTATGGAATCTGATCTTCACCAAGTCATCAAAGCTAATGATGATTTGACCCGGGAGCACCATCAATTTTTTCTTTATCAGATGCTGCGTGCCTTAAAATATATGCATACTGCAAATGTTTATCATCGAGATCTTAAGCCAAAAAATATATTGGCAAATGCTAATTGTAAGCTTAAAATATGTGATTTTGGACTAGCAAGAGTTGCATTCAGTGATACTCCAAGCACAATATTTTGGACGGACTATGTTGCCACAAGATGGTACAGAGCTCCAGAGCTTTGTGGGTCATTTTTCTCCAAGTATACGCCTGCAATTGATATATGGAGCATCGGATGCATCTTTGCTGAAATATTGACAGGGAAGCCATTGTTTCCTGGGAAAAGCGTAATTCATCAATTAGATTTGATCACTGATCTTCTTGGTCGACCTTTATCAGAAACCATTTCAGGAGTTCGAAATGAGAAGGCTAGGAAATACTTGAGCGAAATGCGGAAAAAATCTCCTGTGTCGTTTTCACAGAGATTTCCTAATGTTGATCCATTAGCACTCCGATTACTAGAAAGGCTGTTAGCTTTTGATCCGAAAGATCGACCAACTGCTGAGGAGGCACTGGCTGATCCTTATTTCAAGGGTCTAGCCAAAGTTGAAAGAGAGCCTTCTTGTCAGCCAATTTCCAAATTGGAATTCGAGTTCGAGAGGCGGAGGGTGACGAAGGAGGATATTAGGGAAATACTGTACAGAGAGATACTCGAATACCATCCTCAGCTTCTCAAAGACTATATGAACGGAACGGATGGCACAAATTTTCTCTATCCGAGTGCTATTGGTCACTTCCAAAAACAGTTTGCTCATTTGGAGGAAAATGGCAGCAAAAGTGCGCCTGTTGCGCCTCTTGAGAGAAAGCATGTTTCCCTCCCACGGTATGAATCTTGA 1218 40.8 MDFFTEYGDANRYKILEIIGKGSYGVVCAAIDTHTGEKVAIKKIHDIFEHISDATRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIFVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPSTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEILTGKPLFPGKSVIHQLDLITDLLGRPLSETISGVRNEKARKYLSEMRKKSPVSFSQRFPNVDPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKLEFEFERRRVTKEDIREILYREILEYHPQLLKDYMNGTDGTNFLYPSAIGHFQKQFAHLEENGSKSAPVAPLERKHVSLPRYES 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5263625 5265929 - Bma004136.1 Bma10g00465 89528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00465 405 SMART serkin_6 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00465 405 Gene3D Phosphorylase Kinase; domain 1 28 350 - -
Bma10g00465 405 CDD STKc_TDY_MAPK 12 349 - -
Bma10g00465 405 Gene3D Transferase(Phosphotransferase) domain 1 99 327 - -
Bma10g00465 405 Pfam Protein kinase domain 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00465 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 2 399 - -
Bma10g00465 405 ProSiteProfiles Protein kinase domain profile. 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00465 405 ProSitePatterns Protein kinases ATP-binding region signature. 19 43 IPR017441 GO:0005524
Bma10g00465 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 399 - -
Bma10g00465 405 MobiDBLite consensus disorder prediction 384 405 - -
Bma10g00465 405 SUPERFAMILY Protein kinase-like (PK-like) 9 308 IPR011009 -
Bma10g00465 405 ProSitePatterns MAP kinase signature. 48 151 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00465 Bma-Chr10:5263625 Bma12g00683 Bma-Chr12:28416798 0 dispersed
Bma10g00465 Bma-Chr10:5263625 Bma15g00264 Bma-Chr15:2612270 4.65E-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66732 PF00069 Pkinase 2.30E-66 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00465 - K04371 rcu:8258703 768.459