Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00468 ATGGCGGACGAGGTTCTTCTTCTGGATTTCTGGGCCAGCCCTTTTGGGATGAGGGTGAGGATTGCGTTGGCGGAGAAGGGTATCGAGTATGAGTATAAAGGGGAGGATTTGAGGAACAAGAGCCCTCTTCTTCTTCAGGTGAACCCGGTTCATAAGAAGATTCCGGTTCTCATTCACAATGGGAAGCCTGTTTGTGAGTCCCTGATTGCTTTGGAGTATCTTGAGGATGTTTGGCCGGAGAAATCTCCATTGCTTCCGGCCGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTAACTTTGTGGACAAGAAGGTATATTTTCAGAATTTGTGGATGACAAAAGGAGAAAAACTAGAAACCTCAAAGACTGAATTCAAAGAGTTCTTGAAGATAATGGAAGCAGAGCTTGGAGGCAAAACCTTCTTTGGAGGTGAAAGTTTCGGGTTCCTCGACGTGGCGTTCGTCCCGTTCTACTCGTGGTTTTCGGTCTACGAGAAGTTCGGAAATTTGAGCATAGAGGGGGAATGTCCAAAACTCATTGCATGGGTCAAAAGATGCTTGGAGAAAGAGAGTGTTTCCAAGTCTCTTGCTGATCAGGAGAAGGTTTATGGCTTTGTTTTGCAGATGAGAAAGTCATCTGGGTTAGAGTAG 654 46.18 MADEVLLLDFWASPFGMRVRIALAEKGIEYEYKGEDLRNKSPLLLQVNPVHKKIPVLIHNGKPVCESLIALEYLEDVWPEKSPLLPADPFLRSQARFWANFVDKKVYFQNLWMTKGEKLETSKTEFKEFLKIMEAELGGKTFFGGESFGFLDVAFVPFYSWFSVYEKFGNLSIEGECPKLIAWVKRCLEKESVSKSLADQEKVYGFVLQMRKSSGLE 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5316980 5317814 - Bma004139.1 Bma10g00468 89531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00468 217 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Bma10g00468 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 206 IPR010987 -
Bma10g00468 217 Gene3D - 88 217 - -
Bma10g00468 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 -
Bma10g00468 217 SFLD Glutathione Transferase (cytosolic) 2 214 IPR040079 -
Bma10g00468 217 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Bma10g00468 217 CDD GST_N_Tau 5 78 - -
Bma10g00468 217 Pfam Glutathione S-transferase, C-terminal domain 123 186 - -
Bma10g00468 217 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 211 - -
Bma10g00468 217 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Bma10g00468 217 Gene3D Glutaredoxin 1 87 - -
Bma10g00468 217 SUPERFAMILY GST C-terminal domain-like 76 212 IPR036282 -
Bma10g00468 217 Pfam Glutathione S-transferase, N-terminal domain 7 75 IPR004045 -
Bma10g00468 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00468 Bma-Chr10:5316980 Bma13g00910 Bma-Chr13:39481538 1.21E-117 dispersed
Bma05g01161 Bma-Chr5:50679033 Bma10g00468 Bma-Chr10:5316980 1.15E-47 transposed
Bma09g00524 Bma-Chr9:41896855 Bma10g00468 Bma-Chr10:5316980 4.67E-51 transposed
Bma10g00468 Bma-Chr10:5316980 Bma13g00909 Bma-Chr13:39463942 1.58E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00468 K00799 - cpap:110812529 339.732