Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00476 ATGGAGGCAGTAATGGCGGTGGCTCGTTTCTGCTTCTGTCTTCCAAAAAAACAAACAACTGGAGTAGACAATGTTGAAGACTTATCTGGCATTGACAATGTGTGCTTATACTCTTATGAAGAATTAAAAATCGCCACTGAAAATTTCAGTCCTGCAAATAAGATTGGGCAGGGAGGTTTTGGTTCGGTATACAAGGGGAGGCTCAAAAATGGATCCATGGCTGCTATAAAGGTATTATCAGCACAGTCGATCCAAGGTGAAAGGGAATTTTTGACGGAAATCAATGTAATTGCGGATATTGAGCATGAAAACCTCGTTAAATTGTACGGCTGCTGTATTGAAGGGAACGAGAGGATCTTGGTCTACGGCTATCTAGAAAACAATAGCCTTGCACAAACGCTTCTCGGTGGAGTCCAAAGTAGTATTGAATTCAGTTGGCGAACGCGACATAAAATCTGCATTGGTGTTGCACGGGGGCTAGCTTTCCTTCACGAGGAAGTTAAACCACGAATCATCCACAGAGACATTAAAGCAAGCAATATTCTACTGGACAAGAACCTAATTCCAAAAATTTCAGACTTTGGTCTTGCAAAGCTTATTCCAGATTACATGACCCATGTTAGTACTCGTGTTGCCGGAACAATTGGTTATCTAGCCCCAGAGTACGCCGTACGGGGTCATTTAACGAGGAAATCAGATATTTATAGTTTTGGTGTTTTGTTAATGGAGCTAGTTACTGGGAGATCCCACACAAACAATCGATTGCCTGCTAAAGAACAACATCTAGTTGAAATGATATGGGAGCATTATGAGAATGGAAATTTGGATGAATTGGTCGATAGATTGTTAACCGGAGATTCCAATGAGGACGAGATTCGTAAATCGTTAAAGATCGGTCTTCTTTGCACCCAAGATCTGCCGAAGCTCCGCCCGTCTATGTCGACTGTCGTCAAGATGTTAACGGGTGAAATAAATGCCGATGATATATCAATCTCAAAACCGGGATTGCTTCCCCAATCCATGATTCACGAGGGGACATCAAGCTCCGCTACTCAATGA 1059 42.4 MEAVMAVARFCFCLPKKQTTGVDNVEDLSGIDNVCLYSYEELKIATENFSPANKIGQGGFGSVYKGRLKNGSMAAIKVLSAQSIQGEREFLTEINVIADIEHENLVKLYGCCIEGNERILVYGYLENNSLAQTLLGGVQSSIEFSWRTRHKICIGVARGLAFLHEEVKPRIIHRDIKASNILLDKNLIPKISDFGLAKLIPDYMTHVSTRVAGTIGYLAPEYAVRGHLTRKSDIYSFGVLLMELVTGRSHTNNRLPAKEQHLVEMIWEHYENGNLDELVDRLLTGDSNEDEIRKSLKIGLLCTQDLPKLRPSMSTVVKMLTGEINADDISISKPGLLPQSMIHEGTSSSATQ 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5478334 5480386 + Bma004148.1 Bma10g00476 89539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00476 352 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 10 336 - -
Bma10g00476 352 ProSiteProfiles Protein kinase domain profile. 49 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00476 352 Gene3D Transferase(Phosphotransferase) domain 1 125 332 - -
Bma10g00476 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bma10g00476 352 Gene3D Phosphorylase Kinase; domain 1 16 124 - -
Bma10g00476 352 SMART serkin_6 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00476 352 CDD STKc_IRAK 55 322 - -
Bma10g00476 352 SUPERFAMILY Protein kinase-like (PK-like) 27 320 IPR011009 -
Bma10g00476 352 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 336 - -
Bma10g00476 352 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Bma10g00476 352 Pfam Protein tyrosine and serine/threonine kinase 53 320 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00326 Bma-Chr10:3002364 Bma10g00476 Bma-Chr10:5478334 2.26E-113 dispersed
Bma10g00447 Bma-Chr10:5043720 Bma10g00476 Bma-Chr10:5478334 2.35E-144 dispersed
Bma10g00476 Bma-Chr10:5478334 Bma08g00814 Bma-Chr8:45755198 2.47E-112 dispersed
Bma10g00476 Bma-Chr10:5478334 Bma10g00479 Bma-Chr10:5662858 0 proximal
Bma10g00476 Bma-Chr10:5478334 Bma13g00932 Bma-Chr13:39816946 0 wgd
Bma10g00476 Bma-Chr10:5478334 Bma13g00895 Bma-Chr13:38913506 6.84E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66733 PF07714 PK_Tyr_Ser-Thr 9.30E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00476 - - jre:109012384 471.085