Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00479 | ATGGCTGCTATAAAGGTATTATCAGCACAGTCGATCCAAGGTGAAAGGGAATTTTTGACGGAAATCAATGTAATTGCGGATATTGAGCATGAAAACCTCGTTAAATTGTACGGCTGCTGTATTGAAGGGAACGAGAGGATCTTGGTTTATGGCTATCTAGAAAACAATAGCCTTGCACAAACGCTTCTCGGTGGAGTCCAAAGTAGTATTGAATTCAGTTGGCGAACGCGACATAAAATCTGCGTTGGTGTTGCACGGGGGCTTGCTTTCCTTCACGAGGAAGTTAAACCACGAATCATCCACAGAGACATTAAAGCAAGCAATATTCTACTGGACAAGAACCTAATTCCAAAAATTTCAGACTTTGGTCTTGCAAAGCTTATTCCAGATTACATGTCCCATGTTAGTACTCGTGTTGCTGGAACAATTGGTTATCTAGCCCCAGAGTACGCGGTGCGGGGTCATTTAACGAGAAAATCAGATATTTATAGTTTTGGTGTTTTGTTAATGGAGCTAGTTACTGGGAGATCCCACACAAACAATCGATTGCCTGCTAAAGAACAACATCTAGTTGAAATGATATGGGAGCATTATGAGAATGAAAATTTGGATGAATTGGTCAATAGATTGTTAACCGGAGATTCCAATGAGGACGAGATTCGTAAATCGTTAAAGATCGGTCTTCTTTGCACCCAAGATCTGCCGAAGCTCCGACCATCTATGTCGACTGTCGTCAAGATGTTAACGGGTGAAATAAATGTCGATGATATATCAATCTCAAAACCGGGATTGCTTCCCCAATCCATGATTCACGAGGGGACATCGAGCTCCGCTACTCAGTGA | 843 | 41.99 | MAAIKVLSAQSIQGEREFLTEINVIADIEHENLVKLYGCCIEGNERILVYGYLENNSLAQTLLGGVQSSIEFSWRTRHKICVGVARGLAFLHEEVKPRIIHRDIKASNILLDKNLIPKISDFGLAKLIPDYMSHVSTRVAGTIGYLAPEYAVRGHLTRKSDIYSFGVLLMELVTGRSHTNNRLPAKEQHLVEMIWEHYENENLDELVNRLLTGDSNEDEIRKSLKIGLLCTQDLPKLRPSMSTVVKMLTGEINVDDISISKPGLLPQSMIHEGTSSSATQ | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5662858 | 5664363 | + | Bma004166.1 | Bma10g00479 | 89542 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00479 | 280 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 99 | 111 | IPR008271 | GO:0004672|GO:0006468 | |
Bma10g00479 | 280 | Pfam | Protein tyrosine and serine/threonine kinase | 3 | 248 | IPR001245 | GO:0004672|GO:0006468 | |
Bma10g00479 | 280 | Gene3D | Transferase(Phosphotransferase) domain 1 | 54 | 260 | - | - | |
Bma10g00479 | 280 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 2 | 265 | - | - | |
Bma10g00479 | 280 | ProSiteProfiles | Protein kinase domain profile. | 1 | 237 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma10g00479 | 280 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 53 | - | - | |
Bma10g00479 | 280 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 248 | IPR011009 | - | |
Bma10g00479 | 280 | SMART | serkin_6 | 1 | 225 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma10g00479 | 280 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-RELATED | 2 | 265 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma10g00479 | Bma-Chr10:5662858 | Bma13g00932 | Bma-Chr13:39816946 | 9.60E-161 | dispersed | |
Bma10g00476 | Bma-Chr10:5478334 | Bma10g00479 | Bma-Chr10:5662858 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66734 | PF07714 | PK_Tyr_Ser-Thr | 1.90E-41 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00479 | - | - | jre:108996056 | 402.905 |