Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00479 ATGGCTGCTATAAAGGTATTATCAGCACAGTCGATCCAAGGTGAAAGGGAATTTTTGACGGAAATCAATGTAATTGCGGATATTGAGCATGAAAACCTCGTTAAATTGTACGGCTGCTGTATTGAAGGGAACGAGAGGATCTTGGTTTATGGCTATCTAGAAAACAATAGCCTTGCACAAACGCTTCTCGGTGGAGTCCAAAGTAGTATTGAATTCAGTTGGCGAACGCGACATAAAATCTGCGTTGGTGTTGCACGGGGGCTTGCTTTCCTTCACGAGGAAGTTAAACCACGAATCATCCACAGAGACATTAAAGCAAGCAATATTCTACTGGACAAGAACCTAATTCCAAAAATTTCAGACTTTGGTCTTGCAAAGCTTATTCCAGATTACATGTCCCATGTTAGTACTCGTGTTGCTGGAACAATTGGTTATCTAGCCCCAGAGTACGCGGTGCGGGGTCATTTAACGAGAAAATCAGATATTTATAGTTTTGGTGTTTTGTTAATGGAGCTAGTTACTGGGAGATCCCACACAAACAATCGATTGCCTGCTAAAGAACAACATCTAGTTGAAATGATATGGGAGCATTATGAGAATGAAAATTTGGATGAATTGGTCAATAGATTGTTAACCGGAGATTCCAATGAGGACGAGATTCGTAAATCGTTAAAGATCGGTCTTCTTTGCACCCAAGATCTGCCGAAGCTCCGACCATCTATGTCGACTGTCGTCAAGATGTTAACGGGTGAAATAAATGTCGATGATATATCAATCTCAAAACCGGGATTGCTTCCCCAATCCATGATTCACGAGGGGACATCGAGCTCCGCTACTCAGTGA 843 41.99 MAAIKVLSAQSIQGEREFLTEINVIADIEHENLVKLYGCCIEGNERILVYGYLENNSLAQTLLGGVQSSIEFSWRTRHKICVGVARGLAFLHEEVKPRIIHRDIKASNILLDKNLIPKISDFGLAKLIPDYMSHVSTRVAGTIGYLAPEYAVRGHLTRKSDIYSFGVLLMELVTGRSHTNNRLPAKEQHLVEMIWEHYENENLDELVNRLLTGDSNEDEIRKSLKIGLLCTQDLPKLRPSMSTVVKMLTGEINVDDISISKPGLLPQSMIHEGTSSSATQ 280
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 5662858 5664363 + Bma004166.1 Bma10g00479 89542
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00479 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
Bma10g00479 280 Pfam Protein tyrosine and serine/threonine kinase 3 248 IPR001245 GO:0004672|GO:0006468
Bma10g00479 280 Gene3D Transferase(Phosphotransferase) domain 1 54 260 - -
Bma10g00479 280 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 265 - -
Bma10g00479 280 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00479 280 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Bma10g00479 280 SUPERFAMILY Protein kinase-like (PK-like) 2 248 IPR011009 -
Bma10g00479 280 SMART serkin_6 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00479 280 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 2 265 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00479 Bma-Chr10:5662858 Bma13g00932 Bma-Chr13:39816946 9.60E-161 dispersed
Bma10g00476 Bma-Chr10:5478334 Bma10g00479 Bma-Chr10:5662858 0 proximal
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66734 PF07714 PK_Tyr_Ser-Thr 1.90E-41 CL0016 Bma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00479 - - jre:108996056 402.905