Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00484 ATGCAGAATGAAGTTAGAACTCGTCGACTATGCATGGTCACAGACTATGCTACTCAACAAAAGAAACTGGAAAATCAGTTAAAACTTGATGCTAAGCTTCATGAACTCGAGGTGGAGTGGTGTGGTGGGTCGGAAACAATGGAGGAAATTCTTTCTAGGATTCACAATAGAGAAGAAGCAGCAGCTAGACGAGAGAGAGCCATGGCTTATGCATTCTCTCATCAGTGGAGAGCAAACTCAATATTGCATGTGAGCCAAGCATGTTACAACATGGACAAAGAAAACTGGGGATGGAGCTGGAAACAGAGGTGGATAGCTGCTAGGCCATGGGAGATCAAAGCTCATGCTCATCCCACCATTCCTAAGAAACTACAAACCAAAATCTACTCTAAATCTCCTCTCTCCAATGGAAAACACTCTCTCAAACCCATTAAATTAGTCTAA 444 42.79 MQNEVRTRRLCMVTDYATQQKKLENQLKLDAKLHELEVEWCGGSETMEEILSRIHNREEAAARRERAMAYAFSHQWRANSILHVSQACYNMDKENWGWSWKQRWIAARPWEIKAHAHPTIPKKLQTKIYSKSPLSNGKHSLKPIKLV 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5714220 5714917 - Bma004171.1 Bma10g00484 89547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00484 147 PANTHER IQ-DOMAIN 5-RELATED 1 142 - -
Bma10g00484 147 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00484 Bma-Chr10:5714220 Bma11g01010 Bma-Chr11:45765929 3.41E-53 dispersed
Bma10g00484 Bma-Chr10:5714220 Bma07g01423 Bma-Chr7:50036173 5.07E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00484 - - cmo:103492919 211.846