Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00517 | ATGATGTTATCCGCATCCCCCTCCATGGTAGTGCGGAGCTCGCTAGAGGAAATGCTGGATTCATTGCGGCAGAGAGATGAAAATGAGAAGCCTAAAGACTTGCCGCCTGCACTACCATCACGTCCTATTTCAATAGGTCGGCTTCCCCCTGCAAGACGATCTTTGCCGAGTAACTTCCGTGTTAGCAATGAGGGTGAATCACAGTGCTCTGTTTGTGTGTTCAATGAAAAGGAAGATTCAAATAGGAAAGAGAAAGATGTACGATACGACAGAGGTAGATTTGGATGCAAAAAAATGAGGAAAGATCAAAATGATGAGTCGCCTTATATGTGGAAATATGGATCCGATAAACTTGATCAAGTTAACTTTGATGGTGCTTCTGGTATGTCTTCTGCTTCACAGTTTAATGTTCGGAGGTCAGACTGGGATGACACCATTGATTATTACATTAAGAAGAGGCTTCATGTTTGGTGTCAACTTCCAAGCGGCCAGTGGGCTGCTGGAACAATTAAATCGGCATCAGGAGATGAAGTGTTTATCATGCTTTTCAACAAAGACGTTGTAAAAGTACCTGCGGAAAGCCTTTTACCTGCCAACCCTAGTATTCTAGATGAAGTTGATAACCTTGTACAGCTTAGTTTCCTAAATGAGCCTTCTGTACTTCACAATCTACGGAAGAGATACTCCCTCACTAAGATTTATAGTAAAGCAGGGCCTGTTTTGATTGCACTGAATCCCTTCAAAGATGTCAAAATTTATGGAAATGATTTTGTCGTAGCTTACAGGGAGAAGCTTACAGATAGTCCTCATGTGTTTTCTGTGGCAGAATGTGCTTATATTTTATTCATATTAAACTCACATGTTTTGTTACTAAATGACCACCGTGACGTTTTTTTTTCCAGTGGGCAAAGTGGATCTGGAAAAACTGAGACAGCAAAAATTGCACTCCAATACTTGGTTGCAGTTGCTGGAGATAGTTATGGGATGGGTAACAGAATCTTGCAATCAAATAGTATATTAGAAGCATTTGGGAATGCTAAAACATTTCATAATGACAATTCCAGTCGTTTTGGAAAGGTGATTCAAGTTCAATTTGGCTCCATGGGAAAGATATGTGGTGCTAAATTCCAAACCTGTAAGAATTTTTCTGAGATCATTGTCTGTTCTGGGCAGTCAAGGGTAGTTCAGTTTGCCAATGGAGAGAGATCATTCCACATCTTTTATCAACTTTGTGCTGGTGCTCCGTCCCTTCTTCGAGAAAAACTAAACCTTAATACGGCTAGCGAGTACAAGTATCTTAATCAGAGTGAGTGCTTGAGAATTGACGGTGTTGATGACTCATGGAAGTTTCAGAATCTCCAGGAAGCCCTTGACATTATTCAAATTTGCAAGGAAGATAAAGAGCATATGTATTCAATGCTTGCCGTGGTGTTATGGTTAGGAAACATATCATTTCAAGCGAATGATGGGGAAAATCATGTTGAGGTGGTCACTGACGAAGCATTTACGAATGTGACCAAGCTTTTAGGTTGCAAATCTGAAGACCTTATGTTAGTTTTATCAAAACATAAAAGCCCAGCTGACAAAAATAGTATGGGAAAAAAGCTAACATTACAACAGGCAATCAATTCAAGAGATGCATTTGCCATATTCATCTACGCAAGCTTGTTTGACTGGCTTGTGGAGCAAGTTAATATGTCACTAGAAGTGCAAAAGAAGCATTCTGGAAAATCCATTAGCATATTTGATATTTCTGGGTTTGAGTCATTTAAGAAAAATAACTTTGAACAATTTTGCATAAATTATGCAAACGAGAGACTGCAACAGCATTTCAACAGACATCTTTTAAAACTTGAGCAAGAGGACTGCGAACGGGATGGAATTGGTTGGAATAGAATTATGTTTAAAGACAACCAAGAGTGCTTGAATCTCATTGAGCAGAAACCTCTTGGACTACTAGCTTTACTGGATGAGGAATCACATCTCCCCAAGGCTACCGATCTAACATTTGCAAACAAACTAAAGCATCACTTGAATGGAAATCTTTGCTTTAAAGGAGAAAGAGGAAGAGCTTTTGGAATTTTTCATAATGCTGGAGAGGTAATATACGATACAAATGGATTTTTGGAAAAGAACAAAGATTTATTACCCTATGCGTGCATCGAACTCTTGTCATCAAGTAATTGCAAAGCACTAAAATCATTTGGATCCTCAGTGCCTAACCATTCTGAGATACCAACCATTGGTATGTGTCAGAGAGGCGTATTTGAGTTTTCAAAGCCAACCGTTGGTGCAAGTTTTAAGGAACAATTGTTTAAAGTATTCCATAGTTTGGAGAGTACTAGTCCTCACTTCATCCACTGCATAAAGCCAAATGTCAAACGGGTCCACGATTCATTTGAGGAGGAACTTGTTATACAACAGCTCAAGTGCTGTAATGCTTTTGAGGTCGTCCAGGTATCGAAATATGGATATCCGACTCGACTGACACATCAAAAGTTTGCAGAAAGGTACGGTTTCTTATTGGAGGAGTCCAACACGTCTCACAATCCATTAAACAGATCGGTTGCTGTCTTCCAACAATTTAATTTTCTCCCTGAAATGTATCAAGTTGGTTATACGAAATTGTTTTTCCGGACTGGGCAGATAGAGATATTGGAGGAAAAGAGACAACAGGTACTACGTAGCATACTAAGGTTGCAAAAATTCTTTCGTAGTCGTCAGGCTCGCAATTATTTTCAAGAACTCAAGAATGGAGCCACAATGTTACAATCATTTGTTCGCGGTGAAATAGCAAGAAGGAAAATTACAGTTGTAATAAAGTGGTGCACATCTACTGTTCCTGATAAAACTGATGAGTTGCAGGCTGTTATACAGTTACAATCAGCAATCCGTGGTTTACTAGTACGGAAACGATATAAAATCGTGCATTACTTGAAGAAATTGTATCCAGAGATTCAAGAATCTAAACAAAAGTCAGGCAGGAAAAGTTTTGAAGATAAAAGACAAAAGCAAGTTCAAGTTACGCCTTCTGTTTTGGCAGAGCTTCAAATACGGATTCTTAAAGCAGAAGCAAATTTGCAGACAAAGGAAGAGGAAGCGTCTAGACTGCAAGAGCAAGTACAACAATACGAGGCTAGGTGGTCAGAATATACAGCAAAGATGAAATCAATGGAGGAAATTTGGCGAAAGCAGATGTCATCTTTGCAAATGACTCTTGCTGGAGGACGAAGAAGCCTTGCTGCAGAATTTAACGCCAATCCACCTGGAAGAGTCGAGGCCCCATCACCCCAATATTATGACTCCGAAGATACCATGTCGATGGGATCAAGAACTCCTGGTTGCAGCACGCCCCTCAAATTTTCAACTGCCATTTCCGAAACTGGAACAGGACGTGATACTAACGGAGCTGTGTGTGCAGTTGCGAAACTGGTAAAGGAATTTGAGCGAAAAAAGCAGAGTTTCGACGATGATGTTAAGGTTCTAGTTGAAGCAAAATCAGGGCAATCAGGTTCAGTAATGAATCCGGAGAAAGAAATTAGTAATCTCAGACATAGATTCGACTCATGGAAGAAAGAGTACAAAGTTAGGCTACGAGAGGCGAAAGCAAATATACGAAAGCTCGGGAATTCAGATGAAAGGAGTAGTAGGAGAAAGTGGTGGGGAAAATTAAGCTCAAGAGCATCATAA | 3690 | 39.89 | MMLSASPSMVVRSSLEEMLDSLRQRDENEKPKDLPPALPSRPISIGRLPPARRSLPSNFRVSNEGESQCSVCVFNEKEDSNRKEKDVRYDRGRFGCKKMRKDQNDESPYMWKYGSDKLDQVNFDGASGMSSASQFNVRRSDWDDTIDYYIKKRLHVWCQLPSGQWAAGTIKSASGDEVFIMLFNKDVVKVPAESLLPANPSILDEVDNLVQLSFLNEPSVLHNLRKRYSLTKIYSKAGPVLIALNPFKDVKIYGNDFVVAYREKLTDSPHVFSVAECAYILFILNSHVLLLNDHRDVFFSSGQSGSGKTETAKIALQYLVAVAGDSYGMGNRILQSNSILEAFGNAKTFHNDNSSRFGKVIQVQFGSMGKICGAKFQTCKNFSEIIVCSGQSRVVQFANGERSFHIFYQLCAGAPSLLREKLNLNTASEYKYLNQSECLRIDGVDDSWKFQNLQEALDIIQICKEDKEHMYSMLAVVLWLGNISFQANDGENHVEVVTDEAFTNVTKLLGCKSEDLMLVLSKHKSPADKNSMGKKLTLQQAINSRDAFAIFIYASLFDWLVEQVNMSLEVQKKHSGKSISIFDISGFESFKKNNFEQFCINYANERLQQHFNRHLLKLEQEDCERDGIGWNRIMFKDNQECLNLIEQKPLGLLALLDEESHLPKATDLTFANKLKHHLNGNLCFKGERGRAFGIFHNAGEVIYDTNGFLEKNKDLLPYACIELLSSSNCKALKSFGSSVPNHSEIPTIGMCQRGVFEFSKPTVGASFKEQLFKVFHSLESTSPHFIHCIKPNVKRVHDSFEEELVIQQLKCCNAFEVVQVSKYGYPTRLTHQKFAERYGFLLEESNTSHNPLNRSVAVFQQFNFLPEMYQVGYTKLFFRTGQIEILEEKRQQVLRSILRLQKFFRSRQARNYFQELKNGATMLQSFVRGEIARRKITVVIKWCTSTVPDKTDELQAVIQLQSAIRGLLVRKRYKIVHYLKKLYPEIQESKQKSGRKSFEDKRQKQVQVTPSVLAELQIRILKAEANLQTKEEEASRLQEQVQQYEARWSEYTAKMKSMEEIWRKQMSSLQMTLAGGRRSLAAEFNANPPGRVEAPSPQYYDSEDTMSMGSRTPGCSTPLKFSTAISETGTGRDTNGAVCAVAKLVKEFERKKQSFDDDVKVLVEAKSGQSGSVMNPEKEISNLRHRFDSWKKEYKVRLREAKANIRKLGNSDERSSRRKWWGKLSSRAS | 1229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5994801 | 6004146 | + | Bma004207.1 | Bma10g00517 | 89580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00517 | 1229 | PANTHER | MYOSIN | 35 | 1227 | - | - | |
Bma10g00517 | 1229 | Gene3D | Kinesin motor domain | 203 | 824 | IPR036961 | - | |
Bma10g00517 | 1229 | Gene3D | - | 893 | 941 | - | - | |
Bma10g00517 | 1229 | Coils | Coil | 1013 | 1054 | - | - | |
Bma10g00517 | 1229 | Gene3D | - | 825 | 892 | - | - | |
Bma10g00517 | 1229 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 459 | 567 | - | - | |
Bma10g00517 | 1229 | MobiDBLite | consensus disorder prediction | 1208 | 1229 | - | - | |
Bma10g00517 | 1229 | SMART | MYSc_2a | 198 | 892 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | Gene3D | - | 590 | 781 | - | - | |
Bma10g00517 | 1229 | Coils | Coil | 1191 | 1211 | - | - | |
Bma10g00517 | 1229 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 178 | 976 | IPR027417 | - | |
Bma10g00517 | 1229 | Gene3D | - | 402 | 458 | - | - | |
Bma10g00517 | 1229 | PRINTS | Myosin heavy chain signature | 338 | 365 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | PRINTS | Myosin heavy chain signature | 234 | 253 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | PRINTS | Myosin heavy chain signature | 631 | 659 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | PRINTS | Myosin heavy chain signature | 578 | 606 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | PRINTS | Myosin heavy chain signature | 295 | 320 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 151 | 200 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Bma10g00517 | 1229 | SMART | iq_5 | 892 | 914 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | SMART | iq_5 | 915 | 937 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | SMART | iq_5 | 952 | 974 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | ProSiteProfiles | IQ motif profile. | 895 | 921 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | PANTHER | MYOSIN-2 ISOFORM X1 | 35 | 1227 | - | - | |
Bma10g00517 | 1229 | MobiDBLite | consensus disorder prediction | 18 | 34 | - | - | |
Bma10g00517 | 1229 | ProSiteProfiles | Myosin motor domain profile. | 204 | 891 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | Pfam | IQ calmodulin-binding motif | 919 | 935 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | Pfam | IQ calmodulin-binding motif | 955 | 974 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | Pfam | Myosin head (motor domain) | 206 | 879 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Bma10g00517 | 1229 | ProSiteProfiles | IQ motif profile. | 916 | 945 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | ProSiteProfiles | IQ motif profile. | 953 | 981 | IPR000048 | GO:0005515 | |
Bma10g00517 | 1229 | CDD | MYSc_Myo8 | 218 | 879 | IPR036022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g01334 | Bma-Chr7:48870046 | Bma10g00517 | Bma-Chr10:5994801 | 0 | dispersed | |
Bma10g00517 | Bma-Chr10:5994801 | Bma14g00299 | Bma-Chr14:3715361 | 2.62E-79 | dispersed | |
Bma10g00517 | Bma-Chr10:5994801 | Bma09g00523 | Bma-Chr9:41799897 | 5.18E-151 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00517 | K10357 | - | zju:107430375 | 1432.16 |