Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00536 | ATGTCTGAACTCGACGACCAGATTCCTACCGCCTTTGATCCGTTTGCTGATGCAAATGCTGAGGACTCTGGTGCTGGGGCAAAAGAGTATGTGCACATTCGAATTCAACAGCGGAATGGTAGGAAGAGTCTCACAACTGTGCAGGGACTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTTAAGAAGGAGTTTTGCTGCAATGGTACAGTTGTTCAGGACCCAGAGCTAGGACAGGTTATCCAACTTCAAGGCGACCAACGGAAAAATGTGTCTACATTCCTTATCCAGGCTAATATTGTGAAAAAGGACAATATCAAGATTCATGGTTTCTGA | 342 | 44.15 | MSELDDQIPTAFDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLIQANIVKKDNIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6541071 | 6542117 | + | Bma004233.1 | Bma10g00536 | 89599 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00536 | 113 | PANTHER | BNAA03G48450D PROTEIN | 1 | 113 | - | - | |
Bma10g00536 | 113 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bma10g00536 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743 | |
Bma10g00536 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743|GO:0006413 | |
Bma10g00536 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Bma10g00536 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743 | |
Bma10g00536 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 100 | IPR001950 | GO:0003743|GO:0006413 | |
Bma10g00536 | 113 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 7 | 113 | IPR005874 | GO:0003743 | |
Bma10g00536 | 113 | Gene3D | - | 2 | 113 | - | - | |
Bma10g00536 | 113 | SUPERFAMILY | eIF1-like | 6 | 113 | IPR036877 | GO:0003743|GO:0006413 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma10g00536 | Bma13g01033 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g01294 | Bma-Chr7:48567148 | Bma10g00536 | Bma-Chr10:6541071 | 6.91E-61 | dispersed | |
Bma10g00536 | Bma-Chr10:6541071 | Bma14g00335 | Bma-Chr14:4182271 | 4.45E-62 | dispersed | |
Bma10g00536 | Bma-Chr10:6541071 | Bma13g01033 | Bma-Chr13:42932287 | 1.91E-69 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00536 | K03113 | - | gmx:100499833 | 220.705 |