Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00536 ATGTCTGAACTCGACGACCAGATTCCTACCGCCTTTGATCCGTTTGCTGATGCAAATGCTGAGGACTCTGGTGCTGGGGCAAAAGAGTATGTGCACATTCGAATTCAACAGCGGAATGGTAGGAAGAGTCTCACAACTGTGCAGGGACTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTTAAGAAGGAGTTTTGCTGCAATGGTACAGTTGTTCAGGACCCAGAGCTAGGACAGGTTATCCAACTTCAAGGCGACCAACGGAAAAATGTGTCTACATTCCTTATCCAGGCTAATATTGTGAAAAAGGACAATATCAAGATTCATGGTTTCTGA 342 44.15 MSELDDQIPTAFDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLIQANIVKKDNIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6541071 6542117 + Bma004233.1 Bma10g00536 89599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00536 113 PANTHER BNAA03G48450D PROTEIN 1 113 - -
Bma10g00536 113 MobiDBLite consensus disorder prediction 1 21 - -
Bma10g00536 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Bma10g00536 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Bma10g00536 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Bma10g00536 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Bma10g00536 113 Pfam Translation initiation factor SUI1 28 100 IPR001950 GO:0003743|GO:0006413
Bma10g00536 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Bma10g00536 113 Gene3D - 2 113 - -
Bma10g00536 113 SUPERFAMILY eIF1-like 6 113 IPR036877 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00536 Bma13g01033 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01294 Bma-Chr7:48567148 Bma10g00536 Bma-Chr10:6541071 6.91E-61 dispersed
Bma10g00536 Bma-Chr10:6541071 Bma14g00335 Bma-Chr14:4182271 4.45E-62 dispersed
Bma10g00536 Bma-Chr10:6541071 Bma13g01033 Bma-Chr13:42932287 1.91E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00536 K03113 - gmx:100499833 220.705