Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00586 ATGGAGAATCGGTTTTTGGGAAGCATATCAGCTTCATCGATCCGCAATCTCCTACCTAAATCAATGTCCACTAAGAAGAAACTCAATTCAAGCTTTGCAGTTCTCAAACCTATCTCTGAAAACACTCCACCTCCTGTCGATCCAAACATTCAGATCAACAATGATGACGCCTCAGCTTTGGTTTCAAAACGATTCCCGGCAAAAATTTTGATTTCTCAGCAGGATCCAGCCACAATAACTTCGCCCCGTAAACTATCTGTGCCTCCGGATACACAATTAAAGGTTGTTGTGAGAATCAGATCTCCAAATGATGGGAAGAGGGAGGGAGATCTGAAAGTGAGAAAGTTATCTTCTGATACTTTATTGGTTGGGGAACGAGAATTCGTGTTTGACCAAGTTTTCGATTCGAAATCCAAACAGGAAGACATTTTCCAGCAGGTGGGCGTTCCATTGGTTAAAAATGCATTGGCAGGTTACAACTCGTCGATCTTGTCTTACGGGCAGATTGGAATTGGCAAGACATACACAATGTGGGGTCCACCTAACGCTATGGTTGAGGATATATCAGTTGCTAGTAACCAAGGGATTGTTCCTCGCATTTTCAAAATGCTATTTTTAGAGATTCAGAAAGTTTACAATGAGCAAATTAATGATCTACTAGATCCAACTCAGAAGAACCTTGAGATAAAGGATGATGCGAAAAGTGGATTGTCCTTTGAGAACTTAACTGAAGAATATTTGACAAGCTATGATGATGTGATACAGATTCTTATTAAGGGACTTTCAAGTAGAAAAGCAGGGGCAACCACAGTCAATTCTAAGAGTTCCAGGTCTCATATCAGTGGAAATTCTTCAAGTTTTGGTAGCTCAAAAACAAGCCGAATCAGCTTCATTGATCTGGGAGGTTTGGATAGAAACCTAAATGATGATGTGGATAGACAGTGCATGAGGGAAGCCAAGAATTTGAAAAAGTCACTATCACAACTCGGGCACTTGGCGAAGTCACTTTCAAATGAAGCTCATCCTGGCAAAGCCGAAGATGTTTTGTATACAAATTCTTGTTTGACGCATCTACTGCGAGACTCACTTGGTGGCAATGCTAAGCTCACAGTTATCTGTGTCATTTCTCAAGATAACAATTACATTGTGGAAACATTGAAGACTCTAAGATTTGGACAACGATTAAAATGCGGAAAGAATAAACCTGTAATAAATGAAATAACAGAAGATGGTGTGAATGATCTGAGTGATCAAATTCGTCAATTGAAGGAAGAACTTATAAGAGCCAAGTCACCTGCATGCAGCAGTTCAATGGCAAGTGTAAATGGATATTTTCAAGGCCGAAATGTAAGAGAAAGCTTGAATCAGTTAAGACTTGGCCTTAACCGTTCACTTATTCTTCCAAAGATGGACAATGAGTCTGATAAATACGTTAATTTGGATGAGCAAGACATCAAGGAATTACGTCAACAGCTAGATAAGTTGAATAGTTCTAGTGAATCAATTGAGACAAGTCTTCCTGCCAGAAGAGATTCCCTTAACTTTTCATCAGCTGGCGAAAGTTTTGAAACGGACTCAATGAGTGATGATGATGTAAATAGTCCAGAGGATGAAACTGAAGTTGTAGATATGAACTTAGACAAACCTCAGAATGACAAAATTGAGTCACTACATTGCGTTGCTAGCCATCTAACCTCAAAGGCTATTGAGACTATGATCAGAAGAAGCCTTTCAATCAACTCGAGCCGTCGGTCCCCTATTCTGGAAGACCCCCCATTATCAGAATCTCCAAAAATTGGAAAATCTCAGAGGAAGAGCATGGCTATATCATCGAGTTCCTCACTTTGTAACGATAATAAGTCAGAGAATTCCAAGTTCAAAAACAATGAATCAACGGAGTTGCCATGTCAGAGTGAATGTGAATCCACATTGCAGAGAAGTAAGGTACTTCAAGGTCCAACTGAATCATTGGCTGCTAGTCTACAAAGAGGCTTGAATGTCATTGACTACCACCAGAGAAATTCGGCATCGATCAAATCTTCAGTGTCCTTCTCCTTTGAGCATCTAGCACTGAAAACTATCCCAGCAGCCCCAAAAGCAGACTCATTGACTTTTAAAGAAGTGAACAATGGACCATCCTCTTACCTTTGTGCATCTTGCCGACAAAGACTACACAGAAATGACATAAATGATGTTCACAATAACTCGAAACTACCTTTGGCGGTGGTTAATGAAACTGCAGATTCCATCCTACTCAATCACTTAAATGAGGTATGGCTTTCTCGAAAAATTCACACCCAATATATACATATGATCGAAGATGGTCAAGAAAGTGACAATGCTGGTCCTGAGCCATCGGCTGAAAAACTTTTATCACTTGAGAATGACAAAAGCAATAGTAACTATACATACGAAAACTCTACGAGGGCCGAGCAAGAAAACGAGAAGTTGAAGAAGCAAATGGAGAAACTGAAAGAGAAACACAAGGCCGAGATGGAGACGATGAAACAGTATCTTGCAGATAGCAGATTGCCTTCATCTGCATTGAAGCCACAGTACAGAGAAGAACCAGAAATAGTAAGTGAAGCAGTGGATGAAGATCAGGCATGGAGAGCAGAGTTTGGAGCTATATATCAAGCTCATTACTGA 2649 40.2 MENRFLGSISASSIRNLLPKSMSTKKKLNSSFAVLKPISENTPPPVDPNIQINNDDASALVSKRFPAKILISQQDPATITSPRKLSVPPDTQLKVVVRIRSPNDGKREGDLKVRKLSSDTLLVGEREFVFDQVFDSKSKQEDIFQQVGVPLVKNALAGYNSSILSYGQIGIGKTYTMWGPPNAMVEDISVASNQGIVPRIFKMLFLEIQKVYNEQINDLLDPTQKNLEIKDDAKSGLSFENLTEEYLTSYDDVIQILIKGLSSRKAGATTVNSKSSRSHISGNSSSFGSSKTSRISFIDLGGLDRNLNDDVDRQCMREAKNLKKSLSQLGHLAKSLSNEAHPGKAEDVLYTNSCLTHLLRDSLGGNAKLTVICVISQDNNYIVETLKTLRFGQRLKCGKNKPVINEITEDGVNDLSDQIRQLKEELIRAKSPACSSSMASVNGYFQGRNVRESLNQLRLGLNRSLILPKMDNESDKYVNLDEQDIKELRQQLDKLNSSSESIETSLPARRDSLNFSSAGESFETDSMSDDDVNSPEDETEVVDMNLDKPQNDKIESLHCVASHLTSKAIETMIRRSLSINSSRRSPILEDPPLSESPKIGKSQRKSMAISSSSSLCNDNKSENSKFKNNESTELPCQSECESTLQRSKVLQGPTESLAASLQRGLNVIDYHQRNSASIKSSVSFSFEHLALKTIPAAPKADSLTFKEVNNGPSSYLCASCRQRLHRNDINDVHNNSKLPLAVVNETADSILLNHLNEVWLSRKIHTQYIHMIEDGQESDNAGPEPSAEKLLSLENDKSNSNYTYENSTRAEQENEKLKKQMEKLKEKHKAEMETMKQYLADSRLPSSALKPQYREEPEIVSEAVDEDQAWRAEFGAIYQAHY 882
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7205863 7211372 - Bma004293.1 Bma10g00586 89649

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00586 882 PANTHER CENTROMERE PROTEIN E 69 737 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 496 523 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 792 808 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 496 540 - -
Bma10g00586 882 PANTHER CENTROMERE PROTEIN E 802 882 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 268 291 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 599 632 - -
Bma10g00586 882 Coils Coil 807 841 - -
Bma10g00586 882 Coils Coil 319 339 - -
Bma10g00586 882 PRINTS Kinesin heavy chain signature 158 179 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma10g00586 882 PRINTS Kinesin heavy chain signature 348 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma10g00586 882 PRINTS Kinesin heavy chain signature 269 286 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma10g00586 882 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma10g00586 882 ProSiteProfiles Kinesin motor domain profile. 92 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma10g00586 882 Gene3D Kinesin motor domain 90 439 IPR036961 -
Bma10g00586 882 SMART kinesin_4 90 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma10g00586 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 430 IPR027417 -
Bma10g00586 882 Coils Coil 405 425 - -
Bma10g00586 882 PANTHER KINESIN-LIKE PROTEIN KIN-12F 69 737 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 524 540 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 583 632 - -
Bma10g00586 882 PANTHER KINESIN-LIKE PROTEIN KIN-12F 802 882 - -
Bma10g00586 882 Pfam Kinesin motor domain 124 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma10g00586 882 Coils Coil 478 505 - -
Bma10g00586 882 MobiDBLite consensus disorder prediction 792 817 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00586 K10400 KIF15; kinesin family member 15 - zju:107435502 705.671
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma10g00586 Bma13g01105 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00586 Bma-Chr10:7205863 Bma05g00987 Bma-Chr5:48362815 8.09E-57 dispersed
Bma01g00136 Bma-Chr1:1319351 Bma10g00586 Bma-Chr10:7205863 2.22E-07 transposed
Bma06g01400 Bma-Chr6:50772833 Bma10g00586 Bma-Chr10:7205863 1.07E-10 transposed
Bma10g00586 Bma-Chr10:7205863 Bma13g01105 Bma-Chr13:43992531 1.56E-23 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g604 . . . . Bpe09g00138 . Bma10g00586 Bma13g01105 Cmo16g00977 . . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1198 Cone15ag1218 . Csa03g00446 . Cme06g02803 Blo07g00875 . Bda05g00688 . . Bpe03g00762 . . . . . . Cma16g00939 . Car16g00903 Cpe14g00763 . Bhi11g00510 . . . . . . . . . . . . . Lsi05g00529 . Chy06g01871 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004807 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma10g00586 Bma_Chr10 FPKM 10.424701 11.343167 5.103604 5.304778 9.13695 7.86356 7.383688 10.88635 8.707541 9.560901