Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00603 TCATATATAGTTTACTTGGGAGCACATTCTCATGGCTTAAACCCTTCTGCGTTAGATGTCGAACTTGCGACCAGATCTCATTATGATATGGTGGCTTCATTGTTGGGAAGTCAAGAGAAAGCAGAGGATGCAATTTTCTACTCATATAATCGATACATTAATGGGTTTGCAGGTCCAGTCCCTTCAAGGTGGAAAGGAATATGTCAAACACAGTCCAATGTCCGCTGTAACAGGAAGCTGATCGGAGCTCGGTTTTTCATCAAAGGGTTTGAATCCTACGCCGGAAAACTTAACGCCACTTACCATACAGTTCGAGACAGTGAGGGCCATGGCTCCCATACTCTGTCGACTGCAGGTGGAAGCTTTGTTTCTAAAGCCAGTGTCTTTGGAAATGGCTATGGGACTGCTAAAGGAGGGTCCCCGAAAGCCAGAGTCGCCGCGTACAAAGTATGCTGGCCACCCATCAACGGAAACCAGTGCTTCGACTCCGATATTCTCGCTGGATTTGAGGCTGCGATCGGTGACGGCGTCGACGTTCTCTCCGTGTCGTTAGGAGGTGGTGCTTCGGAGTTTTTCGACGACGGGATTGCGATTGGTTCTTTTCATGCTATGAAGAACGGAATTGTCGTGGTTAGTTCCGCCGGGAACTCTGGACCAACTCCCGGCAGTGTTTCTAATGTGGCGCCATGGATGCTGACAGTCGGAGCTAGCACAATCGACAGAGATTTCGCCAGCTATGTCGGCCTAGGAAATAAAAAGCATCTCCGGGTAAGTCCTAGAACCAGAGACAACAAAGTTCAGCCGATGTTGGACTCGACCATGGAAAAGGCCACGCCTTTCGCCTACGGCTCCGGCCACGTCAGACCCAACCGCGCAATGGCTCCCGGCCTCGTCTACGACCTGACAGTGAAAGACTACCTGAACTTCTTATGCGCTCGTGGCTACGACGAAACCAACCTCAAATTGTTCGCCAACGAGACCTACGCTTGTCCGAAGTCGTTCAGCCTGACGGATTTCAACTACCCTTCCATCTCCATTCCTGTTCAAATCAAAACCTCTGTGACGGTCACTCGAACGGTTAAGAATGTCGGCACTCCGGGCACTTACGTGGCCACAGTGAAAGCTCCTCGCGGGATTTCAGTTTCGGTGAGTCCAAAGACGTTGAGTTTTAAGAAAGTAGGGGAGGAGATGAAGTTCAGTGTTGTGTTAAAGTCCAGAAGCTCGAAGGTTGTTCGCGAAGACTACGGCTTTGGATCGTTGACGTGGTCGGATGGGAAGCACTACGTGAGGAGTCCTATCGTTGTTAAATTAAGTTAG 1317 49.96 SYIVYLGAHSHGLNPSALDVELATRSHYDMVASLLGSQEKAEDAIFYSYNRYINGFAGPVPSRWKGICQTQSNVRCNRKLIGARFFIKGFESYAGKLNATYHTVRDSEGHGSHTLSTAGGSFVSKASVFGNGYGTAKGGSPKARVAAYKVCWPPINGNQCFDSDILAGFEAAIGDGVDVLSVSLGGGASEFFDDGIAIGSFHAMKNGIVVVSSAGNSGPTPGSVSNVAPWMLTVGASTIDRDFASYVGLGNKKHLRVSPRTRDNKVQPMLDSTMEKATPFAYGSGHVRPNRAMAPGLVYDLTVKDYLNFLCARGYDETNLKLFANETYACPKSFSLTDFNYPSISIPVQIKTSVTVTRTVKNVGTPGTYVATVKAPRGISVSVSPKTLSFKKVGEEMKFSVVLKSRSSKVVREDYGFGSLTWSDGKHYVRSPIVVKLS 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7341529 7344536 + Bma004310.1 Bma10g00603 89666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00603 438 SUPERFAMILY Subtilisin-like 66 253 IPR036852 GO:0004252|GO:0006508
Bma10g00603 438 Gene3D - 240 269 - -
Bma10g00603 438 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1 57 - -
Bma10g00603 438 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 58 256 - -
Bma10g00603 438 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 259 436 - -
Bma10g00603 438 ProSiteProfiles Serine proteases, subtilase domain profile. 1 438 - -
Bma10g00603 438 Pfam Subtilase family 100 361 IPR000209 GO:0006508|GO:0008236
Bma10g00603 438 Gene3D - 310 437 - -
Bma10g00603 438 Pfam Fibronectin type-III domain 338 435 IPR041469 -
Bma10g00603 438 Pfam Peptidase inhibitor I9 1 60 IPR010259 -
Bma10g00603 438 Gene3D Peptidase S8/S53 domain 58 239 IPR036852 GO:0004252|GO:0006508
Bma10g00603 438 PANTHER PEPTIDASE S8 1 57 - -
Bma10g00603 438 PANTHER PEPTIDASE S8 58 256 - -
Bma10g00603 438 PANTHER PEPTIDASE S8 259 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00603 Bma-Chr10:7341529 Bma08g00698 Bma-Chr8:42372644 3.67E-58 dispersed
Bma10g00603 Bma-Chr10:7341529 Bma08g00694 Bma-Chr8:42238206 3.47E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00603 - - vvi:100854364 320.857