Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00603 TCATATATAGTTTACTTGGGAGCACATTCTCATGGCTTAAACCCTTCTGCGTTAGATGTCGAACTTGCGACCAGATCTCATTATGATATGGTGGCTTCATTGTTGGGAAGTCAAGAGAAAGCAGAGGATGCAATTTTCTACTCATATAATCGATACATTAATGGGTTTGCAGGTCCAGTCCCTTCAAGGTGGAAAGGAATATGTCAAACACAGTCCAATGTCCGCTGTAACAGGAAGCTGATCGGAGCTCGGTTTTTCATCAAAGGGTTTGAATCCTACGCCGGAAAACTTAACGCCACTTACCATACAGTTCGAGACAGTGAGGGCCATGGCTCCCATACTCTGTCGACTGCAGGTGGAAGCTTTGTTTCTAAAGCCAGTGTCTTTGGAAATGGCTATGGGACTGCTAAAGGAGGGTCCCCGAAAGCCAGAGTCGCCGCGTACAAAGTATGCTGGCCACCCATCAACGGAAACCAGTGCTTCGACTCCGATATTCTCGCTGGATTTGAGGCTGCGATCGGTGACGGCGTCGACGTTCTCTCCGTGTCGTTAGGAGGTGGTGCTTCGGAGTTTTTCGACGACGGGATTGCGATTGGTTCTTTTCATGCTATGAAGAACGGAATTGTCGTGGTTAGTTCCGCCGGGAACTCTGGACCAACTCCCGGCAGTGTTTCTAATGTGGCGCCATGGATGCTGACAGTCGGAGCTAGCACAATCGACAGAGATTTCGCCAGCTATGTCGGCCTAGGAAATAAAAAGCATCTCCGGGTAAGTCCTAGAACCAGAGACAACAAAGTTCAGCCGATGTTGGACTCGACCATGGAAAAGGCCACGCCTTTCGCCTACGGCTCCGGCCACGTCAGACCCAACCGCGCAATGGCTCCCGGCCTCGTCTACGACCTGACAGTGAAAGACTACCTGAACTTCTTATGCGCTCGTGGCTACGACGAAACCAACCTCAAATTGTTCGCCAACGAGACCTACGCTTGTCCGAAGTCGTTCAGCCTGACGGATTTCAACTACCCTTCCATCTCCATTCCTGTTCAAATCAAAACCTCTGTGACGGTCACTCGAACGGTTAAGAATGTCGGCACTCCGGGCACTTACGTGGCCACAGTGAAAGCTCCTCGCGGGATTTCAGTTTCGGTGAGTCCAAAGACGTTGAGTTTTAAGAAAGTAGGGGAGGAGATGAAGTTCAGTGTTGTGTTAAAGTCCAGAAGCTCGAAGGTTGTTCGCGAAGACTACGGCTTTGGATCGTTGACGTGGTCGGATGGGAAGCACTACGTGAGGAGTCCTATCGTTGTTAAATTAAGTTAG 1317 49.96 SYIVYLGAHSHGLNPSALDVELATRSHYDMVASLLGSQEKAEDAIFYSYNRYINGFAGPVPSRWKGICQTQSNVRCNRKLIGARFFIKGFESYAGKLNATYHTVRDSEGHGSHTLSTAGGSFVSKASVFGNGYGTAKGGSPKARVAAYKVCWPPINGNQCFDSDILAGFEAAIGDGVDVLSVSLGGGASEFFDDGIAIGSFHAMKNGIVVVSSAGNSGPTPGSVSNVAPWMLTVGASTIDRDFASYVGLGNKKHLRVSPRTRDNKVQPMLDSTMEKATPFAYGSGHVRPNRAMAPGLVYDLTVKDYLNFLCARGYDETNLKLFANETYACPKSFSLTDFNYPSISIPVQIKTSVTVTRTVKNVGTPGTYVATVKAPRGISVSVSPKTLSFKKVGEEMKFSVVLKSRSSKVVREDYGFGSLTWSDGKHYVRSPIVVKLS 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7341529 7344536 + Bma004310.1 Bma10g00603 89666

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00603 438 SUPERFAMILY Subtilisin-like 66 253 IPR036852 GO:0004252|GO:0006508
Bma10g00603 438 Gene3D - 240 269 - -
Bma10g00603 438 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1 57 - -
Bma10g00603 438 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 58 256 - -
Bma10g00603 438 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 259 436 - -
Bma10g00603 438 ProSiteProfiles Serine proteases, subtilase domain profile. 1 438 - -
Bma10g00603 438 Pfam Subtilase family 100 361 IPR000209 GO:0006508|GO:0008236
Bma10g00603 438 Gene3D - 310 437 - -
Bma10g00603 438 Pfam Fibronectin type-III domain 338 435 IPR041469 -
Bma10g00603 438 Pfam Peptidase inhibitor I9 1 60 IPR010259 -
Bma10g00603 438 Gene3D Peptidase S8/S53 domain 58 239 IPR036852 GO:0004252|GO:0006508
Bma10g00603 438 PANTHER PEPTIDASE S8 1 57 - -
Bma10g00603 438 PANTHER PEPTIDASE S8 58 256 - -
Bma10g00603 438 PANTHER PEPTIDASE S8 259 436 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00603 - - - vvi:100854364 320.857
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00603 Bma-Chr10:7341529 Bma08g00698 Bma-Chr8:42372644 3.67E-58 dispersed
Bma10g00603 Bma-Chr10:7341529 Bma08g00694 Bma-Chr8:42238206 3.47E-58 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma06g01211 . 504 1151 Subtilisin-like Serine Gene Family AT1G01900 50.7 4.0e-193 671.8
Bma13g00716 CCT 1 767 Subtilisin-like Serine Gene Family AT1G04110 68.2 9.9e-314 1072.4
Bma11g00613 . 25 759 Subtilisin-like Serine Gene Family AT1G04110 50.1 1.2e-197 686.8
Bma01g02383 . 1 682 Subtilisin-like Serine Gene Family AT1G20150 50.6 7.6e-184 641.0
Bma01g02383 . 1 423 Subtilisin-like Serine Gene Family AT1G20160 56.8 1.4e-123 440.3
Bma10g00603 . 58 256 Subtilisin-like Serine Gene Family AT1G20160 51.7 1.6e-47 187.6
Bma14g00888 . 14 764 Subtilisin-like Serine Gene Family AT1G30600 68.0 9.2e-305 1042.7
Bma05g00545 . 53 770 Subtilisin-like Serine Gene Family AT1G32940 56.8 1.7e-230 795.8
Bma12g00418 . 23 399 Subtilisin-like Serine Gene Family AT1G32940 54.0 5.7e-109 392.1
Bma05g00545 . 53 770 Subtilisin-like Serine Gene Family AT1G32950 55.7 7.9e-228 786.9
Bma12g00418 . 23 399 Subtilisin-like Serine Gene Family AT1G32950 52.1 8.5e-105 378.3
Bma05g00545 . 24 770 Subtilisin-like Serine Gene Family AT1G32960 56.8 3.8e-244 841.3
Bma12g00418 . 23 399 Subtilisin-like Serine Gene Family AT1G32960 53.4 9.8e-107 384.8
Bma05g00545 . 26 770 Subtilisin-like Serine Gene Family AT1G32970 50.7 7.3e-205 710.7
Bma12g00418 . 28 399 Subtilisin-like Serine Gene Family AT1G32970 54.7 1.5e-109 394.0
Bma14g00912 . 36 874 Subtilisin-like Serine Gene Family AT1G62340 55.8 4.4e-254 874.4
Bma05g00545 . 11 765 Subtilisin-like Serine Gene Family AT1G66210 50.4 6.2e-199 691.0
Bma14g00928 CCT 6 742 Subtilisin-like Serine Gene Family AT2G04160 60.0 1.2e-261 899.4
Bma08g00694 . 1 668 Subtilisin-like Serine Gene Family AT2G04160 66.0 1.2e-261 899.4
Bma08g00698 . 4 665 Subtilisin-like Serine Gene Family AT2G04160 59.7 1.0e-244 843.2
Bma01g00517 . 34 769 Subtilisin-like Serine Gene Family AT2G04160 56.3 1.2e-242 836.3
Bma11g00613 . 24 762 Subtilisin-like Serine Gene Family AT2G05920 70.3 4.7e-308 1053.5
Bma01g00262 . 19 758 Subtilisin-like Serine Gene Family AT2G05920 67.9 3.5e-287 984.2
Bma06g00357 . 31 766 Subtilisin-like Serine Gene Family AT2G05920 56.8 1.5e-232 802.7
Bma03g01131 . 28 761 Subtilisin-like Serine Gene Family AT2G05920 56.0 6.1e-231 797.3
Bma05g00049 . 28 763 Subtilisin-like Serine Gene Family AT2G05920 54.7 8.9e-222 766.9
Bma14g02104 . 26 778 Subtilisin-like Serine Gene Family AT2G05920 50.5 2.6e-213 738.8
Bma15g00318 . 61 796 Subtilisin-like Serine Gene Family AT2G05920 52.9 9.8e-213 736.9
Bma01g00673 . 32 761 Subtilisin-like Serine Gene Family AT2G05920 52.0 1.9e-200 696.0
Bma10g00711 . 26 774 Subtilisin-like Serine Gene Family AT2G05920 50.7 9.5e-200 693.7
Bma10g00670 . 24 772 Subtilisin-like Serine Gene Family AT2G05920 50.7 9.5e-200 693.7
Bma02g00721 . 30 435 Subtilisin-like Serine Gene Family AT2G05920 51.4 1.6e-109 394.0
Bma06g01023 . 6 819 Subtilisin-like Serine Gene Family AT2G19170 82.0 0.0e+00 1357.4
Bma06g01026 . 3 816 Subtilisin-like Serine Gene Family AT2G19170 81.8 0.0e+00 1355.5
Bma01g00394 . 28 823 Subtilisin-like Serine Gene Family AT2G19170 82.6 0.0e+00 1347.0
Bma15g00318 . 50 803 Subtilisin-like Serine Gene Family AT3G14067 66.9 1.3e-297 1018.8
Bma06g00357 . 12 766 Subtilisin-like Serine Gene Family AT3G14067 53.0 4.8e-223 771.2
Bma03g01131 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 52.6 4.5e-221 764.6
Bma11g00613 . 28 762 Subtilisin-like Serine Gene Family AT3G14067 54.2 8.6e-220 760.4
Bma01g00262 . 21 756 Subtilisin-like Serine Gene Family AT3G14067 54.3 3.7e-215 745.0
Bma10g00711 . 22 780 Subtilisin-like Serine Gene Family AT3G14067 50.5 2.3e-196 682.6
Bma10g00670 . 20 778 Subtilisin-like Serine Gene Family AT3G14067 50.5 2.3e-196 682.6
Bma02g00721 . 26 435 Subtilisin-like Serine Gene Family AT3G14067 51.7 2.9e-111 399.8
Bma10g00711 . 31 782 Subtilisin-like Serine Gene Family AT3G14240 74.2 0.0e+00 1136.3
Bma10g00670 . 29 780 Subtilisin-like Serine Gene Family AT3G14240 73.9 0.0e+00 1135.6
Bma06g00357 . 33 762 Subtilisin-like Serine Gene Family AT3G14240 53.4 6.5e-220 760.8
Bma03g01131 . 30 757 Subtilisin-like Serine Gene Family AT3G14240 53.2 3.6e-218 755.0
Bma15g00318 . 60 794 Subtilisin-like Serine Gene Family AT3G14240 52.3 1.2e-213 740.0
Bma11g00613 . 28 758 Subtilisin-like Serine Gene Family AT3G14240 50.6 3.3e-211 731.9
Bma01g00262 . 22 752 Subtilisin-like Serine Gene Family AT3G14240 51.5 6.3e-207 717.6
Bma05g00049 . 31 759 Subtilisin-like Serine Gene Family AT3G14240 50.5 6.3e-207 717.6
Bma02g00721 . 33 437 Subtilisin-like Serine Gene Family AT3G14240 61.4 1.6e-141 500.4
Bma06g01265 . 431 1126 Subtilisin-like Serine Gene Family AT3G46840 51.3 4.5e-186 648.3
Bma06g01265 . 431 1123 Subtilisin-like Serine Gene Family AT3G46850 52.0 2.7e-191 665.6
Bma01g01956 . 17 576 Subtilisin-like Serine Gene Family AT4G00230 50.4 1.2e-149 526.9
Bma06g01211 . 24 395 Subtilisin-like Serine Gene Family AT4G00230 59.1 3.9e-132 468.8
Bma05g00545 . 53 770 Subtilisin-like Serine Gene Family AT4G10510 55.1 5.7e-226 780.8
Bma12g00418 . 29 399 Subtilisin-like Serine Gene Family AT4G10510 53.5 1.5e-106 384.0
Bma05g00545 . 26 765 Subtilisin-like Serine Gene Family AT4G10520 55.5 1.4e-235 812.8
Bma12g00418 . 25 399 Subtilisin-like Serine Gene Family AT4G10520 54.0 2.6e-104 376.7
Bma05g00545 . 26 765 Subtilisin-like Serine Gene Family AT4G10530 53.6 2.7e-223 771.9
Bma05g00545 . 12 770 Subtilisin-like Serine Gene Family AT4G10540 55.3 6.5e-244 840.5
Bma12g00418 . 29 399 Subtilisin-like Serine Gene Family AT4G10540 52.4 1.1e-105 381.3
Bma05g00545 . 53 770 Subtilisin-like Serine Gene Family AT4G10550 55.6 8.5e-230 793.5
Bma12g00418 . 29 399 Subtilisin-like Serine Gene Family AT4G10550 52.7 1.0e-102 371.3
Bma14g00888 . 12 764 Subtilisin-like Serine Gene Family AT4G20430 72.1 0.0e+00 1105.1
Bma05g00545 . 24 765 Subtilisin-like Serine Gene Family AT4G21630 53.3 1.5e-216 749.6
Bma12g00418 . 39 394 Subtilisin-like Serine Gene Family AT4G21630 51.0 6.0e-93 339.0
Bma05g00545 . 24 765 Subtilisin-like Serine Gene Family AT4G21640 51.1 1.2e-202 703.4
Bma12g00418 . 41 391 Subtilisin-like Serine Gene Family AT4G21640 52.6 2.6e-93 340.1
Bma05g00545 . 25 765 Subtilisin-like Serine Gene Family AT4G21650 53.5 1.5e-221 766.1
Bma12g00418 . 30 394 Subtilisin-like Serine Gene Family AT4G21650 50.3 6.5e-95 345.5
Bma07g00315 . 1 488 Subtilisin-like Serine Gene Family AT4G26330 53.1 7.2e-152 534.6
Bma01g00394 . 11 823 Subtilisin-like Serine Gene Family AT4G30020 81.3 0.0e+00 1354.0
Bma06g01023 . 6 819 Subtilisin-like Serine Gene Family AT4G30020 81.5 0.0e+00 1352.0
Bma06g01026 . 3 816 Subtilisin-like Serine Gene Family AT4G30020 81.4 0.0e+00 1351.3
Bma10g00711 . 24 782 Subtilisin-like Serine Gene Family AT4G34980 54.1 1.1e-227 786.6
Bma10g00670 . 9 780 Subtilisin-like Serine Gene Family AT4G34980 54.0 5.4e-227 784.3
Bma15g00318 . 43 794 Subtilisin-like Serine Gene Family AT4G34980 51.8 3.2e-211 731.9
Bma06g00357 . 27 762 Subtilisin-like Serine Gene Family AT4G34980 51.6 3.9e-209 724.9
Bma11g00613 . 26 758 Subtilisin-like Serine Gene Family AT4G34980 50.5 1.0e-204 710.3
Bma03g01131 . 24 757 Subtilisin-like Serine Gene Family AT4G34980 50.4 1.3e-199 693.3
Bma02g00721 . 21 439 Subtilisin-like Serine Gene Family AT4G34980 76.4 6.9e-190 661.0
Bma10g00603 . 58 256 Subtilisin-like Serine Gene Family AT4G34980 52.9 4.8e-50 196.4
Bma01g01956 . 34 567 Subtilisin-like Serine Gene Family AT5G03620 61.1 8.4e-188 653.7
Bma08g01100 . 3 475 Subtilisin-like Serine Gene Family AT5G03620 50.9 2.7e-122 436.0
Bma07g01628 . 2 322 Subtilisin-like Serine Gene Family AT5G03620 50.3 1.0e-84 311.2
Bma10g00603 . 58 251 Subtilisin-like Serine Gene Family AT5G03620 52.3 1.6e-50 197.6
Bma07g00493 . 299 1062 Subtilisin-like Serine Gene Family AT5G19660 78.1 0.0e+00 1248.8
Bma14g00888 . 1 540 Subtilisin-like Serine Gene Family AT5G44530 71.4 5.2e-236 813.9
Bma07g00806 CCT 70 775 Subtilisin-like Serine Gene Family AT5G45640 54.1 3.3e-216 748.4
Bma07g00806 CCT 15 777 Subtilisin-like Serine Gene Family AT5G45650 61.4 1.4e-270 929.1
Bma14g02104 . 23 782 Subtilisin-like Serine Gene Family AT5G51750 69.0 0.0e+00 1095.1
Bma06g00357 . 31 766 Subtilisin-like Serine Gene Family AT5G51750 52.9 1.8e-225 779.2
Bma03g01131 . 28 761 Subtilisin-like Serine Gene Family AT5G51750 52.9 1.2e-224 776.5
Bma05g00049 . 27 763 Subtilisin-like Serine Gene Family AT5G51750 52.3 4.9e-223 771.2
Bma11g00613 . 24 762 Subtilisin-like Serine Gene Family AT5G51750 50.2 2.3e-217 752.3
Bma01g00262 . 20 756 Subtilisin-like Serine Gene Family AT5G51750 50.1 5.6e-211 731.1
Bma10g00603 . 59 253 Subtilisin-like Serine Gene Family AT5G51750 50.5 1.0e-50 198.7
Bma06g01265 . 431 1124 Subtilisin-like Serine Gene Family AT5G58820 50.8 1.0e-179 627.1
Bma06g01265 . 431 1123 Subtilisin-like Serine Gene Family AT5G58830 50.8 1.2e-183 640.2
Bma10g00603 . 58 255 Subtilisin-like Serine Gene Family AT5G58830 52.3 5.2e-46 183.0
Bma06g01265 . 431 957 Subtilisin-like Serine Gene Family AT5G58840 52.6 1.6e-148 523.1
Bma06g01265 . 428 1123 Subtilisin-like Serine Gene Family AT5G59090 50.8 8.7e-182 634.0
Bma06g01265 . 429 1126 Subtilisin-like Serine Gene Family AT5G59100 50.7 8.2e-196 680.6
Bma06g01265 . 430 1124 Subtilisin-like Serine Gene Family AT5G59120 51.9 8.4e-193 670.6
Bma10g00603 . 58 255 Subtilisin-like Serine Gene Family AT5G59120 51.3 1.8e-46 184.5
Bma06g01265 . 429 1124 Subtilisin-like Serine Gene Family AT5G59130 50.8 2.8e-188 655.6
Bma06g01265 . 439 1127 Subtilisin-like Serine Gene Family AT5G59190 50.1 1.8e-184 642.9
Bma10g00603 . 58 255 Subtilisin-like Serine Gene Family AT5G59190 51.8 8.6e-46 182.2
Bma14g00928 CCT 1 745 Subtilisin-like Serine Gene Family AT5G59810 68.8 1.3e-305 1045.4
Bma01g00517 . 32 772 Subtilisin-like Serine Gene Family AT5G59810 65.1 2.2e-284 974.9
Bma08g00694 . 2 668 Subtilisin-like Serine Gene Family AT5G59810 62.2 1.2e-237 819.7
Bma08g00698 . 9 665 Subtilisin-like Serine Gene Family AT5G59810 56.9 1.2e-224 776.5
Bma06g00357 . 16 767 Subtilisin-like Serine Gene Family AT5G67360 71.9 0.0e+00 1096.6
Bma03g01131 . 27 762 Subtilisin-like Serine Gene Family AT5G67360 71.6 0.0e+00 1077.0
Bma05g00049 . 12 764 Subtilisin-like Serine Gene Family AT5G67360 66.7 3.0e-294 1007.7
Bma01g00673 . 14 762 Subtilisin-like Serine Gene Family AT5G67360 61.7 1.8e-267 918.7
Bma11g00613 . 25 763 Subtilisin-like Serine Gene Family AT5G67360 56.8 3.4e-229 791.6
Bma14g02104 . 25 778 Subtilisin-like Serine Gene Family AT5G67360 55.0 4.4e-229 791.2
Bma01g00262 . 22 756 Subtilisin-like Serine Gene Family AT5G67360 57.4 7.0e-227 783.9
Bma15g00318 . 55 796 Subtilisin-like Serine Gene Family AT5G67360 53.8 3.9e-217 751.5
Bma10g00711 . 23 777 Subtilisin-like Serine Gene Family AT5G67360 50.7 3.4e-205 711.8
Bma10g00670 . 11 775 Subtilisin-like Serine Gene Family AT5G67360 50.1 1.7e-204 709.5
Bma02g00721 . 13 439 Subtilisin-like Serine Gene Family AT5G67360 50.5 4.4e-112 402.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0017348 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 6
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma10g00603 Bma_Chr10 FPKM 47.773628 50.419212 1.973993 2.015428 0.0 0.0 0.0 0.0 0.0 0.0