Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00660 | ATGGTGAAGTATTGGAGCTGGAGCTGGAGCTGGCGGTTTATGCTCATCAACATCTGCATTTTTGAATGGAGACCTACTCTCATACATTGTGCTACAGATCAAGGGGATGCTGCCGCTCTAAAGACCATGTACACCTCTTTAAATTCTCCACCTCAGTTAACCCAGTGGAGTGCAACTGGTGATGATCCATGCGGGCAGTCTTGGAAAGGTGTTTCTTGCTCAGGCTCACGGGTCACCGAAATCGAACTATCTGGCCTGGGACTTTCTGGATCAGTGGGATACCAGCTCACAAGTTTAACGGCACTGACCAACCTAGATCTGAGCAACAACAATCTTGGAGGGCAGATGCCTTATCAGCTACCACCAAAGTTACTGAGATTAAATCTTGGTCGTAATAACTTTAATGGAGCCATACAGTACTCTATATATCAAATGACTACTCTAAAGTACCTGAATATCAGCCATAACCAGCTTCAGTATCAACTAATTGATATGTTTGGCGGCTTTTCTTCTCTAGTCACGCTGGATATTTCATATAATTCTTTTTCGGGTGACCTCCCCAAGAGTTTTAGCTCCCTCTCCAGTATGAACACTATGTACTTGCAAAACAACCAGTTCACTGGCACCATTGACGTCCTCGCAAATCTTCCCCTTGAAAATTTGAATATTGAGAACAACCGATTTACTGGCTGGATTCCCGAGCAATTAGAAAACATCAATTTGCAGAAAAATGGTAACTCTTGGAGTTCCGGGCCTGCACCCCCTCCTCCACCTGGTACGCCTCCAGCCCCTAGCCGAAATCGCAACTCTAATGGAAATAACAGCCCCTCGGGTAGTGGTGGTAATAAATCAGGAATAGGAGGTGGGGCCATTGCTGGAATAATTATATCTGTTCTTATTGTTGGCTCGATTGTTGTCTTTTTCCTTGTAAAGAAAAGATCTAGGAAGACATCTTCAGACGTAGAAAAGCTCAACGACCAGCCTTTCACGCCTCTTGCTTCGAATGAAGTTCATGAAATGAAGTCGGTAGAAACTACCACCACGTTCAACACCAAGACATTTGATCCTTCAATTGGATTAAATCTTAAACCCCCACCTATTGATCGTCACAAATCATTTGATGAAGATGATTTCACAAAGAAAGCTGTCATCAAAAAGGTCAATAAGGCCCCCATAAATGTAAAATCATTTTCAATAGCTGATTTGCAGATGGCTACTGGGAGCTTCAATGTCGAAAATCTTCTTGGTGAAGGGTCATTTGGGCGTGTTTATCGGGCTCAGTTTGATGATGGCAAGGTCTTTGCTGTGAAGAAAATAGATTCATCTGCAATTTCCAGTGATTTTTTTGAAGATTTCACCGAAATTGTGTCAAAAATCTCCCATTTGCATCACCCTAATGTCACTGAGCTGATGGGTTATTGCTCAGAGCACGGGCAGCATCTGCTAGTTTATGAATTTCATAAAAATGGTTCCCTTCATGACTTCTTACATTTATCTGATGAATACTGTAAGCCGCTAACATGGAACTCACGTGTCAAAATCGCATTAGGAATTGCACGGGCATTGGAGTACCTGCATGAAGTTTGTTCACCATCAATTGTTCATAAAAATATGAAATCAGCGAATATATTACTCGATGCTGAACTCAATCCTCACCTTTCAGACTGTGGACTGGCCAGCTTCATGTCAGATCAGGCATTGGACAACAATACAGGATCTGGATACAGTGCCCCTGAGGTCACCATGTCTGGTCAATACAGTCTGAAGAGTGATGTCTACAGTTTTGGAGTCGTCATGTTGGAGCTTCTTAGCGGCCGAAAACCATTTGACAGTTCAAGATCAAGAGATGAACAATCCTTGGTTCGGTGGGCTACTCCACAGCTACATGACATTGATGCTTTATCCAAAATGGTTGATCCACAACTCGAAGGGCTCTACCCAGTTAAATCGCTCTCCCGATTTGCAGATGTGATTGCTCTTTGTGTACAGCCTGAGCCAGAGTTCAGACCACCAATGTCCGATGCGGTGCAAGCCCTGGTTGTACTCATGCAAAGGTCTAACATGAGTAAGAGAACGGTCAGAAACAATCATGGATCGCCCCCTCAAGCTGATGCGCAGGACAATTCGTAA | 2130 | 43.62 | MVKYWSWSWSWRFMLINICIFEWRPTLIHCATDQGDAAALKTMYTSLNSPPQLTQWSATGDDPCGQSWKGVSCSGSRVTEIELSGLGLSGSVGYQLTSLTALTNLDLSNNNLGGQMPYQLPPKLLRLNLGRNNFNGAIQYSIYQMTTLKYLNISHNQLQYQLIDMFGGFSSLVTLDISYNSFSGDLPKSFSSLSSMNTMYLQNNQFTGTIDVLANLPLENLNIENNRFTGWIPEQLENINLQKNGNSWSSGPAPPPPPGTPPAPSRNRNSNGNNSPSGSGGNKSGIGGGAIAGIIISVLIVGSIVVFFLVKKRSRKTSSDVEKLNDQPFTPLASNEVHEMKSVETTTTFNTKTFDPSIGLNLKPPPIDRHKSFDEDDFTKKAVIKKVNKAPINVKSFSIADLQMATGSFNVENLLGEGSFGRVYRAQFDDGKVFAVKKIDSSAISSDFFEDFTEIVSKISHLHHPNVTELMGYCSEHGQHLLVYEFHKNGSLHDFLHLSDEYCKPLTWNSRVKIALGIARALEYLHEVCSPSIVHKNMKSANILLDAELNPHLSDCGLASFMSDQALDNNTGSGYSAPEVTMSGQYSLKSDVYSFGVVMLELLSGRKPFDSSRSRDEQSLVRWATPQLHDIDALSKMVDPQLEGLYPVKSLSRFADVIALCVQPEPEFRPPMSDAVQALVVLMQRSNMSKRTVRNNHGSPPQADAQDNS | 709 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9492498 | 9498245 | - | Bma004385.1 | Bma10g00660 | 89723 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00660 | 709 | MobiDBLite | consensus disorder prediction | 250 | 264 | - | - | |
Bma10g00660 | 709 | Gene3D | Ribonuclease Inhibitor | 30 | 257 | IPR032675 | - | |
Bma10g00660 | 709 | MobiDBLite | consensus disorder prediction | 242 | 282 | - | - | |
Bma10g00660 | 709 | MobiDBLite | consensus disorder prediction | 265 | 282 | - | - | |
Bma10g00660 | 709 | SUPERFAMILY | Protein kinase-like (PK-like) | 391 | 681 | IPR011009 | - | |
Bma10g00660 | 709 | CDD | STKc_IRAK | 415 | 679 | - | - | |
Bma10g00660 | 709 | SUPERFAMILY | L domain-like | 31 | 238 | - | - | |
Bma10g00660 | 709 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 | 23 | 706 | - | - | |
Bma10g00660 | 709 | PRINTS | Leucine-rich repeat signature | 102 | 115 | - | - | |
Bma10g00660 | 709 | PRINTS | Leucine-rich repeat signature | 145 | 158 | - | - | |
Bma10g00660 | 709 | ProSiteProfiles | Protein kinase domain profile. | 409 | 682 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma10g00660 | 709 | Pfam | Leucine rich repeat | 122 | 181 | IPR001611 | GO:0005515 | |
Bma10g00660 | 709 | Pfam | Leucine rich repeat N-terminal domain | 35 | 74 | IPR013210 | - | |
Bma10g00660 | 709 | PANTHER | OS01G0253100 PROTEIN | 23 | 706 | IPR045271 | GO:0004714|GO:0006468 | |
Bma10g00660 | 709 | Gene3D | Phosphorylase Kinase; domain 1 | 371 | 486 | - | - | |
Bma10g00660 | 709 | Gene3D | Transferase(Phosphotransferase) domain 1 | 488 | 703 | - | - | |
Bma10g00660 | 709 | MobiDBLite | consensus disorder prediction | 690 | 709 | - | - | |
Bma10g00660 | 709 | ProSitePatterns | Protein kinases ATP-binding region signature. | 415 | 438 | IPR017441 | GO:0005524 | |
Bma10g00660 | 709 | Pfam | Protein kinase domain | 410 | 677 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01505 | Bma-Chr4:51075316 | Bma10g00660 | Bma-Chr10:9492498 | 5.90E-11 | dispersed | |
Bma09g01001 | Bma-Chr9:49512925 | Bma10g00660 | Bma-Chr10:9492498 | 0 | dispersed | |
Bma10g00660 | Bma-Chr10:9492498 | Bma13g01172 | Bma-Chr13:45031311 | 6.41E-152 | dispersed | |
Bma10g00660 | Bma-Chr10:9492498 | Bma13g01189 | Bma-Chr13:45177803 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66738 | PF00069 | Pkinase | 9.30E-43 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00660 | - | - | vvi:100249831 | 967.222 |