Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00660 ATGGTGAAGTATTGGAGCTGGAGCTGGAGCTGGCGGTTTATGCTCATCAACATCTGCATTTTTGAATGGAGACCTACTCTCATACATTGTGCTACAGATCAAGGGGATGCTGCCGCTCTAAAGACCATGTACACCTCTTTAAATTCTCCACCTCAGTTAACCCAGTGGAGTGCAACTGGTGATGATCCATGCGGGCAGTCTTGGAAAGGTGTTTCTTGCTCAGGCTCACGGGTCACCGAAATCGAACTATCTGGCCTGGGACTTTCTGGATCAGTGGGATACCAGCTCACAAGTTTAACGGCACTGACCAACCTAGATCTGAGCAACAACAATCTTGGAGGGCAGATGCCTTATCAGCTACCACCAAAGTTACTGAGATTAAATCTTGGTCGTAATAACTTTAATGGAGCCATACAGTACTCTATATATCAAATGACTACTCTAAAGTACCTGAATATCAGCCATAACCAGCTTCAGTATCAACTAATTGATATGTTTGGCGGCTTTTCTTCTCTAGTCACGCTGGATATTTCATATAATTCTTTTTCGGGTGACCTCCCCAAGAGTTTTAGCTCCCTCTCCAGTATGAACACTATGTACTTGCAAAACAACCAGTTCACTGGCACCATTGACGTCCTCGCAAATCTTCCCCTTGAAAATTTGAATATTGAGAACAACCGATTTACTGGCTGGATTCCCGAGCAATTAGAAAACATCAATTTGCAGAAAAATGGTAACTCTTGGAGTTCCGGGCCTGCACCCCCTCCTCCACCTGGTACGCCTCCAGCCCCTAGCCGAAATCGCAACTCTAATGGAAATAACAGCCCCTCGGGTAGTGGTGGTAATAAATCAGGAATAGGAGGTGGGGCCATTGCTGGAATAATTATATCTGTTCTTATTGTTGGCTCGATTGTTGTCTTTTTCCTTGTAAAGAAAAGATCTAGGAAGACATCTTCAGACGTAGAAAAGCTCAACGACCAGCCTTTCACGCCTCTTGCTTCGAATGAAGTTCATGAAATGAAGTCGGTAGAAACTACCACCACGTTCAACACCAAGACATTTGATCCTTCAATTGGATTAAATCTTAAACCCCCACCTATTGATCGTCACAAATCATTTGATGAAGATGATTTCACAAAGAAAGCTGTCATCAAAAAGGTCAATAAGGCCCCCATAAATGTAAAATCATTTTCAATAGCTGATTTGCAGATGGCTACTGGGAGCTTCAATGTCGAAAATCTTCTTGGTGAAGGGTCATTTGGGCGTGTTTATCGGGCTCAGTTTGATGATGGCAAGGTCTTTGCTGTGAAGAAAATAGATTCATCTGCAATTTCCAGTGATTTTTTTGAAGATTTCACCGAAATTGTGTCAAAAATCTCCCATTTGCATCACCCTAATGTCACTGAGCTGATGGGTTATTGCTCAGAGCACGGGCAGCATCTGCTAGTTTATGAATTTCATAAAAATGGTTCCCTTCATGACTTCTTACATTTATCTGATGAATACTGTAAGCCGCTAACATGGAACTCACGTGTCAAAATCGCATTAGGAATTGCACGGGCATTGGAGTACCTGCATGAAGTTTGTTCACCATCAATTGTTCATAAAAATATGAAATCAGCGAATATATTACTCGATGCTGAACTCAATCCTCACCTTTCAGACTGTGGACTGGCCAGCTTCATGTCAGATCAGGCATTGGACAACAATACAGGATCTGGATACAGTGCCCCTGAGGTCACCATGTCTGGTCAATACAGTCTGAAGAGTGATGTCTACAGTTTTGGAGTCGTCATGTTGGAGCTTCTTAGCGGCCGAAAACCATTTGACAGTTCAAGATCAAGAGATGAACAATCCTTGGTTCGGTGGGCTACTCCACAGCTACATGACATTGATGCTTTATCCAAAATGGTTGATCCACAACTCGAAGGGCTCTACCCAGTTAAATCGCTCTCCCGATTTGCAGATGTGATTGCTCTTTGTGTACAGCCTGAGCCAGAGTTCAGACCACCAATGTCCGATGCGGTGCAAGCCCTGGTTGTACTCATGCAAAGGTCTAACATGAGTAAGAGAACGGTCAGAAACAATCATGGATCGCCCCCTCAAGCTGATGCGCAGGACAATTCGTAA 2130 43.62 MVKYWSWSWSWRFMLINICIFEWRPTLIHCATDQGDAAALKTMYTSLNSPPQLTQWSATGDDPCGQSWKGVSCSGSRVTEIELSGLGLSGSVGYQLTSLTALTNLDLSNNNLGGQMPYQLPPKLLRLNLGRNNFNGAIQYSIYQMTTLKYLNISHNQLQYQLIDMFGGFSSLVTLDISYNSFSGDLPKSFSSLSSMNTMYLQNNQFTGTIDVLANLPLENLNIENNRFTGWIPEQLENINLQKNGNSWSSGPAPPPPPGTPPAPSRNRNSNGNNSPSGSGGNKSGIGGGAIAGIIISVLIVGSIVVFFLVKKRSRKTSSDVEKLNDQPFTPLASNEVHEMKSVETTTTFNTKTFDPSIGLNLKPPPIDRHKSFDEDDFTKKAVIKKVNKAPINVKSFSIADLQMATGSFNVENLLGEGSFGRVYRAQFDDGKVFAVKKIDSSAISSDFFEDFTEIVSKISHLHHPNVTELMGYCSEHGQHLLVYEFHKNGSLHDFLHLSDEYCKPLTWNSRVKIALGIARALEYLHEVCSPSIVHKNMKSANILLDAELNPHLSDCGLASFMSDQALDNNTGSGYSAPEVTMSGQYSLKSDVYSFGVVMLELLSGRKPFDSSRSRDEQSLVRWATPQLHDIDALSKMVDPQLEGLYPVKSLSRFADVIALCVQPEPEFRPPMSDAVQALVVLMQRSNMSKRTVRNNHGSPPQADAQDNS 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9492498 9498245 - Bma004385.1 Bma10g00660 89723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00660 709 MobiDBLite consensus disorder prediction 250 264 - -
Bma10g00660 709 Gene3D Ribonuclease Inhibitor 30 257 IPR032675 -
Bma10g00660 709 MobiDBLite consensus disorder prediction 242 282 - -
Bma10g00660 709 MobiDBLite consensus disorder prediction 265 282 - -
Bma10g00660 709 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Bma10g00660 709 CDD STKc_IRAK 415 679 - -
Bma10g00660 709 SUPERFAMILY L domain-like 31 238 - -
Bma10g00660 709 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 23 706 - -
Bma10g00660 709 PRINTS Leucine-rich repeat signature 102 115 - -
Bma10g00660 709 PRINTS Leucine-rich repeat signature 145 158 - -
Bma10g00660 709 ProSiteProfiles Protein kinase domain profile. 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00660 709 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Bma10g00660 709 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Bma10g00660 709 PANTHER OS01G0253100 PROTEIN 23 706 IPR045271 GO:0004714|GO:0006468
Bma10g00660 709 Gene3D Phosphorylase Kinase; domain 1 371 486 - -
Bma10g00660 709 Gene3D Transferase(Phosphotransferase) domain 1 488 703 - -
Bma10g00660 709 MobiDBLite consensus disorder prediction 690 709 - -
Bma10g00660 709 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Bma10g00660 709 Pfam Protein kinase domain 410 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01505 Bma-Chr4:51075316 Bma10g00660 Bma-Chr10:9492498 5.90E-11 dispersed
Bma09g01001 Bma-Chr9:49512925 Bma10g00660 Bma-Chr10:9492498 0 dispersed
Bma10g00660 Bma-Chr10:9492498 Bma13g01172 Bma-Chr13:45031311 6.41E-152 dispersed
Bma10g00660 Bma-Chr10:9492498 Bma13g01189 Bma-Chr13:45177803 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66738 PF00069 Pkinase 9.30E-43 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00660 - - vvi:100249831 967.222