Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00662 ATGGGAACAAATATGTATCCATCTTCTTCGTTGCTAGGCCGAGAAAAAGATGAACATGAAGCTCTTCCGGTGGACGAGCTCATTGAGAAAGCAGATGGCTTCGCTGGAGTATTTCCAGAACACAAATACGAAATCGTTAGAATTTTGCAAGACAAGAAGCATGTGGTTGGAATGACTGGGGATGGTGTGAACGACGCACCTGCTTTGAAGAAAGCAGATATTGGTATAGCAGTGGCAGATGCTACAGATGCAGCAAGAAGTGCTGCAGATATAGTCTTAACTGAGCCTGGTCTAAGTGTCATTATCAGTGCCGTCTTGACTAGCCGAGCAATTTTCCAAAGAATGAAGAATTATACAATATATGCCGTCTCAATCACCATTCGTATTGTGCTTGGTTTTGTGCTTCTAGCTTTGATATGGGAATTTGATTTCCCTCCTTTCATGGTCCTGATCATCGCAATATTGAACGATGGAACCATCATGACTATTTCTAAAGATCGAGTCCGACCATCGCCAAGGCCGGATAGTTGGAAGCTCCCTGAGATCTTTGCTACAGGGATTGTCATTGGCACATATCTTGCTCTAGTTACCGTCCTATTCTACTGGTTGGTTGTGGGTACAGACTTCTTCGAGACTCGATTTCACGTAGATTCCTTGAAAAGTAACACCGAGAAAGTTGCAGCCGCTGTATATCTGCAAGTGAGCATCATCAGCCAGGCTCTCATATTCGTCACTCGTAGCCAAGGATGGTCATTTATGGAGAGGCCCGGAGCTCTCTTGATGTGTGCATTTGTGGTGGCTCAGCTGGTGGCTACCTTAATAGCAGTCTACGCAAATATAAGTTTCGCTTTTATCAACGGTATCGGGTGGGGATGGGCAGGGGTCATCTGGCTCTACAGCTTCATCTTCTACTTGCCTCTAGATGTTATCAAGTTCACAATTCGCTATATCTTGAGTGGAGAAGCTTGGAATCTTTTATTTGACAGAAAGACACTGTTTACTTCGAAGAAGGACTACGGCAGCGAAGATAGGGCAGCTAAGTGGGTGCAGTCTCAAAGAAGTCTAAAAGGGTTAGGATCATCCGCAGATTTGGAGATCAATGGTCGGCGATCGTCTTTAATCGCAGAACAGGCCAGGAGGCGAGCTGAAATAGCAAGGCTAGGAGAGATGCATACTCTGAAAGGACATATAGAATCTGTGGTGAGGCTTAAAAACTTGGACGTGGGTGTAATTCAATCTGCTCATACAGTCTAA 1254 44.82 MGTNMYPSSSLLGREKDEHEALPVDELIEKADGFAGVFPEHKYEIVRILQDKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVRPSPRPDSWKLPEIFATGIVIGTYLALVTVLFYWLVVGTDFFETRFHVDSLKSNTEKVAAAVYLQVSIISQALIFVTRSQGWSFMERPGALLMCAFVVAQLVATLIAVYANISFAFINGIGWGWAGVIWLYSFIFYLPLDVIKFTIRYILSGEAWNLLFDRKTLFTSKKDYGSEDRAAKWVQSQRSLKGLGSSADLEINGRRSSLIAEQARRRAEIARLGEMHTLKGHIESVVRLKNLDVGVIQSAHTV 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9527553 9529750 - Bma004387.1 Bma10g00662 89725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00662 417 Gene3D - 97 285 - -
Bma10g00662 417 PANTHER CALCIUM-TRANSPORTING ATPASE 1 398 - -
Bma10g00662 417 Gene3D - 369 417 - -
Bma10g00662 417 Gene3D - 1 96 IPR023214 -
Bma10g00662 417 PRINTS H+-transporting ATPase (proton pump) signature 31 47 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00662 417 PRINTS H+-transporting ATPase (proton pump) signature 231 252 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00662 417 PRINTS H+-transporting ATPase (proton pump) signature 59 75 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00662 417 PRINTS H+-transporting ATPase (proton pump) signature 90 115 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00662 417 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 398 - -
Bma10g00662 417 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 34 147 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00662 417 Pfam haloacid dehalogenase-like hydrolase 28 73 - -
Bma10g00662 417 PRINTS P-type cation-transporting ATPase superfamily signature 59 78 - -
Bma10g00662 417 PRINTS P-type cation-transporting ATPase superfamily signature 82 94 - -
Bma10g00662 417 SUPERFAMILY HAD-like 11 105 IPR036412 -
Bma10g00662 417 SUPERFAMILY Calcium ATPase, transmembrane domain M 108 318 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00662 Bma-Chr10:9527553 Bma01g02129 Bma-Chr1:77782617 0 dispersed
Bma10g00662 Bma-Chr10:9527553 Bma10g00701 Bma-Chr10:10603985 0 wgd
Bma10g00662 Bma-Chr10:9527553 Bma13g01188 Bma-Chr13:45155670 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00662 K01535 - tcc:18596330 706.827