Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00666 ATGGATTCCATCAACTCCTTCAAGGGCTACGACAAGGTGGACGAGGCTGAAGCTCGAGAATTCCGGCGGAAAACTCGCCGGCGTCTCGTCATTATGGTGGTTTCCGCTGTCGTTCTCGTTGGTTTAGTTGTCGGCGTAGTTGCCGGTACTGTGATTCACAAGCGAAATAGTTCATCTTCTTCCTCCTCCACACAGTCGACTCCGCCTGCGTATATTAAAACTCTGTGCGAGATGACGGAATATCCAACCTCGTGTATTGCTTCACTAGAGGCATCGAATAGCACCGAACCAGAAGCTCTCTTCAAGTTTTCTCTGCAAATCGCCATGACTGAGCTCTCCAAGCTCTCTCACTTCCCCACCCAGAACATCACCAGTGATACAAAGCTTAACGAAACCTTGTGGCTCTGCCAGACGCTCTTCGAAGACGCGATCGACAGCCTCAACGACTCCATATCGGCCATGGAAGTAGGCGAAGGAGAAAAGCTCTTGACTGAGTCAAAAATCAACGACTTAAAAACCTGGCTCAGCACCACCATTACCGACCAGGAAACTTGTTTGGACGGACTTGAAGATCTAAACTCCACGCTCGTCGACGAGATGAGAACTGCAATGAAAAACTCCTCCGAGCTTGTGAGCAACAGTTTAGCCATTGCAACGAAAATCCTGGGTCTGTTGGCCGATTTCAATATTCCGATTCACCGGAGGTTGCTCGGGTTCAGAGGCACCGATTCAGATTTTCCGGAATGGGTAAGCGGCGGAGATCGGAGGTTGCTGCAATCTAACAATGTGACGGCCAATGTGATTGTGGCGAAGGACGGGAGCGGGAAGTACAAGACGATTTCAGATGCGGTCAAGGCTGTGCCGAGAAAGAGCAAAACGAGATTTATTATATATGTTAAGGCAGGAACGTATAACGAGATTGTGAGGTTGGATAAGAACATGTGGAACGTTATGATGATCGGCGACGGAAAAACGAAGACCATTGTTACCGGTAGCTTGAACTTCGTCGATGGCACACCTACTTTCTCCACACCCACTTTCGCTGCCGTCGGGAAAGGATTTATCGCCAGAGACATGGGTTTCGTCAACACAGCAGGACCAGCCAAGCACCAGGCGGTGGCGTTCCGGTCAGGATCAGACCTTTCGGTATTCTCCGGCTGCTCATTCGATGCCTACCAAGACACCCTCTACTCCCATTCCAATCGCCAATTCTACCGTGACTGTGACATAACCGGCACTATCGATTTCATCTTCGGAAACGCGGCCGTCGTCTTCCAAAACTGCAACATCATGCCTAGACAGCCATTAAGCAACCAGTTTAACACCATCACAGCACAGGGCAAAACAGACCCTAATCAGAACACCGGCATTTCTATCCAAAAGTGCAATCTTTCAACTCTGCGTGGTGTCGTTCTCTCCGCTCAAACTTACCTCGGGAGGCCATGGAAAGCATATTCCACGACAGTCATCATGCAGTCCAATGTTGGGTCATTCCTTAACCCCTTGGGCTGGACTCCATGGGTCACAAACGTCCAGCCTCCCAGCACTATCTATTACGCTGAGTATCAGAACACTGGTCCTGGCTCGTCTGTCGCCAAAAGGGTTAAGTGGTCTGGTTATAAGCCAGCTCTGACAGCAGCTCAAGCCGGAAAATTTACAGTAAACTCTTTCATACAAGGTAGCGATTGGTTGCCAGCGACAAATGTCAAATTTGATACATCGTTATGA 1728 49.42 MDSINSFKGYDKVDEAEAREFRRKTRRRLVIMVVSAVVLVGLVVGVVAGTVIHKRNSSSSSSSTQSTPPAYIKTLCEMTEYPTSCIASLEASNSTEPEALFKFSLQIAMTELSKLSHFPTQNITSDTKLNETLWLCQTLFEDAIDSLNDSISAMEVGEGEKLLTESKINDLKTWLSTTITDQETCLDGLEDLNSTLVDEMRTAMKNSSELVSNSLAIATKILGLLADFNIPIHRRLLGFRGTDSDFPEWVSGGDRRLLQSNNVTANVIVAKDGSGKYKTISDAVKAVPRKSKTRFIIYVKAGTYNEIVRLDKNMWNVMMIGDGKTKTIVTGSLNFVDGTPTFSTPTFAAVGKGFIARDMGFVNTAGPAKHQAVAFRSGSDLSVFSGCSFDAYQDTLYSHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIMPRQPLSNQFNTITAQGKTDPNQNTGISIQKCNLSTLRGVVLSAQTYLGRPWKAYSTTVIMQSNVGSFLNPLGWTPWVTNVQPPSTIYYAEYQNTGPGSSVAKRVKWSGYKPALTAAQAGKFTVNSFIQGSDWLPATNVKFDTSL 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9652008 9653840 + Bma004395.1 Bma10g00666 89729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00666 575 CDD PMEI-like_3 74 221 - -
Bma10g00666 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 221 IPR035513 -
Bma10g00666 575 SUPERFAMILY Pectin lyase-like 264 571 IPR011050 -
Bma10g00666 575 SMART PMEI_2 67 217 IPR006501 GO:0004857
Bma10g00666 575 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Bma10g00666 575 Gene3D - 260 575 IPR012334 -
Bma10g00666 575 PANTHER PECTINESTERASE 1-RELATED 9 572 - -
Bma10g00666 575 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 221 IPR006501 GO:0004857
Bma10g00666 575 PANTHER PECTINESTERASE 9 572 - -
Bma10g00666 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 222 IPR035513 -
Bma10g00666 575 Pfam Plant invertase/pectin methylesterase inhibitor 71 217 IPR006501 GO:0004857
Bma10g00666 575 ProSitePatterns Pectinesterase signature 1. 291 310 IPR018040 -
Bma10g00666 575 Pfam Pectinesterase 266 560 IPR000070 GO:0030599|GO:0042545
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00666 Bma13g01193 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01544 Bma-Chr1:34984686 Bma10g00666 Bma-Chr10:9652008 3.64E-176 dispersed
Bma08g00237 Bma-Chr8:2911100 Bma10g00666 Bma-Chr10:9652008 2.15E-38 dispersed
Bma09g00750 Bma-Chr9:45969162 Bma10g00666 Bma-Chr10:9652008 4.86E-126 dispersed
Bma10g00666 Bma-Chr10:9652008 Bma13g01193 Bma-Chr13:45200804 1.02E-93 dispersed
Bma15g00533 Bma-Chr15:6156349 Bma10g00666 Bma-Chr10:9652008 6.44E-128 dispersed
Bma10g00665 Bma-Chr10:9604969 Bma10g00666 Bma-Chr10:9652008 3.53E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00666 - - pavi:110761660 791.956