Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00685 ATGCCCATAGCCGAAGGTGCAGTTTCCGATTTGTTTGGTCGCCCGCTCTTCTTTTCACTATATGATTGGTTCTTAGAGCATGGCTCTGTATACAAACTTGCATTTGGGCCAAAAGCATTTGTTGTTGTATCTGATCCAATTGTTGCAAGACATATTCTCAGAGAAAATGCATTTTCCTACGACAAGGGAGTCCTTGCTGATATTCTAGAGCCAATAATGGGCAAAGGGCTTATACCAGCTGACCTTGACACCTGGAAGCAGAGAAGAAGAGTGATCGCTCCTGGATTCCATTCGTTATACTTGGAAGCTATGGTTGAAGTATTTGCTGATTGCACAGAACGGTCAATACTGAAATTTCTTAAGCTTCTAGGAGAAATTGAACTATGCGAAGGAAAGATGATTGAGTTGGATCTTGAGGCAGAGTTTTCTAATTTGGCTCTTGATATTATTGGGCTTAGTGTTTTCAACTTTGACTTTGGTTCTGTTACCAAAGAATCTCCTGTGATCAAGGCAGTGTATGGAACTCTTTTTGAAGCGGAGCATAGATCCACATTCTACATTCCATATTGGAAATTACCTCTAGCAAATTGGATTGTCCCTCGGCAACAAAAATTTCAAAAGGACCTCAAAGTAATCAATGATTGTCTTGATGGTCTCATTAGAAATGCAAAAGAAAGCAGAGAGGAAACAGATGTTGAGAAACTACAGCAGAGGGACTACTCTAATCTCAAGGATGCTAGTCTGCTCCGTTTTTTAGTTGATATGCGAGGAGCAGATGTTGATGATCGTCAGCTTAGGGATGACTTGATGACCATGCTTATAGCTGGGCATGAAACTACAGCCGCAGTGCTTACTTGGGCCGTATTCCTTCTTTCTCAAAACCCTTCAAAAATGAGAAAAGCACAGGCAGAAGTTGATTCAGTGCTTGGACAGGGGCACCCGACGCTTGAATCACTTAAATCATTGGAGTACATCAGGCTGATCATCGTGGAGGCTCTTCGTTTGTATCCTCAGCCGCCTTTGCTAATAAGACGGTCTCTCAGATCAGATGTTTTGCCAGGAGGTCAGAAGGGTGAAAAAGATGGTTATGCAATTCCTGCTGGCACTGATATCTTCATCTCTGTTTATAATCTTCACAGATCTCCATACTTTTGGGACAATCCTCATGAATTTGAACCAGAGAGGTTTACAGTTGAAAAGAAGAGCGAAATTGAAGGATGGTCCGGTTTCGATCCATCTCGAAGCCCCGGAGCTTTGTACCCGAATGAGGTCATATCAGACTTTTCCTTCTTACCATTTGGTGGGGGGCCAAGAAAATGCGTGGGAGACCAATTTGCACTAATGGAATCCACTGTGGCATTGGCTATGCTGTTGCAAAAGTTCGACGTCCAACTAAAAGGGTCGGCAGACGACGTCCAGCTCGTCACTGGTGCGACCATACATACCAAAAACGGAATGTGGTGCAAGTTGAGTAAGAGAGCTGACTTAGGTTGA 1494 43.31 MPIAEGAVSDLFGRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHSLYLEAMVEVFADCTERSILKFLKLLGEIELCEGKMIELDLEAEFSNLALDIIGLSVFNFDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKLPLANWIVPRQQKFQKDLKVINDCLDGLIRNAKESREETDVEKLQQRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLSQNPSKMRKAQAEVDSVLGQGHPTLESLKSLEYIRLIIVEALRLYPQPPLLIRRSLRSDVLPGGQKGEKDGYAIPAGTDIFISVYNLHRSPYFWDNPHEFEPERFTVEKKSEIEGWSGFDPSRSPGALYPNEVISDFSFLPFGGGPRKCVGDQFALMESTVALAMLLQKFDVQLKGSADDVQLVTGATIHTKNGMWCKLSKRADLG 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10382896 10396568 - Bma004427.1 Bma10g00685 89748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00685 497 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 1 493 - -
Bma10g00685 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Bma10g00685 497 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS E-class P450 group I signature 24 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 PANTHER CYTOCHROME P450 FAMILY 4 1 493 - -
Bma10g00685 497 Pfam Cytochrome P450 24 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 Gene3D Cytochrome P450 3 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00685 497 SUPERFAMILY Cytochrome P450 12 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00606 Bma-Chr2:13853481 Bma10g00685 Bma-Chr10:10382896 7.80E-115 dispersed
Bma10g00685 Bma-Chr10:10382896 Bma04g00114 Bma-Chr4:901436 5.03E-42 dispersed
Bma10g00685 Bma-Chr10:10382896 Bma01g01203 Bma-Chr1:13771592 2.43E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00685 K24543 - tcc:18612266 888.641