Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00701 ATGGATGAAGATCTGGAGAGACCATTGCTCAATCCTGATAATTTCAACAGGGATAATATTGATTTGGAACGACTGCCCTTGGACGAAGTTTTCGAGCAACTCAGAACGTCACCCCAGGGCCTTACCACTGCAGATGCCGAAGCTCGACAGTTAATATTTGGCATGAACAAACTCGAAGAAAAGCCGGAGAACAAATTTGTAAAATTTCTGGGATTCATGTGGAATCCACTGTCATGGGTCATGGAAGCTGCAGCAGTGATGGCCATTGCTCTTGCTAATGGTGGAGGCCAAGGTCCTGACTGGCAAGATTTTGTGGGTATCGTTTGCCTGCTCTTGATCAACTCAACCATTAGTTTTATAGAAGAAAACAATGCTGGAAATGCAGCTGCAGCCCTCATGGCCCGTTTAGCTCCAAAAACAAAAGTTCTTAGAGATGGGCGGTGGCAAGAACAAGACGCGGCTGTTTTAGTACCTGGAGACATAATTAGCATCAAACTAGGAGATATTATCCCTGCAGATGCTCGTTTGCTTGAAGGAGATCCGCTGAAGATCGACCAGTCATCTCTAACTGGAGAATCCTTACCGGTCACCAAGAGGACAGGTGATGAAGTATATTCTGGTTCTACTTGTAAGCATGGAGAGATTGAGGCTGTAGTTATTGCAACTGGAGTTCACTCGTTTTTTGGAAAGGCAGCTCACTTAGTTGACTCCACCATAGTTGTCGGACATTTTCAGAAGGTCCTTACCTCCATCGGAAATTTCTGCATTTGTTCGATAGCCGTGGGGATGATTCTTGAAATCATTGTCATGTTCCCCGTCCAGCACCGTACCTATCGAAACGGAATCAACAACCTCCTCGTTCTATTGATCGGAGGAATTCCCATCGCTATGCCGACAGTTTTGTCCGTGACACTGGCTATTGGCTCTCACCGGCTATCCCAACAGGGTGCCATCACAAAAAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTCTGCAGCGATAAAACAGGAACTCTTACCCTGAATCGCCTCTCTGTAGACAAAAATCTCGTCGAGGTTTTTAACAAAGATATGGACAAAGACACAGTTGTCTTGTTTGCAGCTAGAGCATCCAGAATGGAGAATCAAGATGCTATTGATGCAGCCATTGTCAACATGCTTGGTGATCCAAAGGAGGCTCGAACAAACATCAAGGAAGTGCATTTTCTGCCTTTCAATCCAGTCGATAAACGTACTGCTATTACCTATGTCGACTCAGATGGTAATTGGCATCGTACCAGCAAAGGCGCCCCCGAACAGATTCTAAATCTATGCAAAGAGAGAGATGCGATTAGGGGCAAAGTGCTCTCCATCATAGACAAATTTGCTGAAAGGGGTTTGCGATCACTTGGAGTTGCATACCAGACAGTTCCGGAAAGAAGTAAGGAAAGCCTGGGAAGTGAGTGGACATTTTGCGGGTTGTTGCCTTTGTTCGATCCTCCGAGACATGATAGTGCAGAGACCATCCGCCGAGCACTTAACCTTGGAGTATGCGTGAAGATGATTACCGGTGATCAGTTGGCTATCGCAAAGGAGACAGGCCGACGTCTTGGTATGGGAACAAATATGTATCCATCTTCTTCGTTGCTAGGCCGAGAAAAAGATGAACATGAAGCTCTTCCGGTGGACGAGCTCATTGAGAAAGCAGATGGCTTCGCTGGAGTATTTCCAGAACACAAATACGAAATCGTTAGAATTTTGCAAGACAAGAAGCATGTGGTTGGAATGACTGGGGATGGTGTGAACGACGCACCTGCTTTGAAGAAAGCAGATATTGGTATAGCAGTGGCAGATGCTACAGATGCAGCAAGAAGTGCTGCAGATATAGTCTTAACTGAGCCTGGTCTAAGTGTCATTATCAGTGCCGTCTTGACTAGCCGAGCAATTTTCCAAAGAATGAAGAATTATACAATATATGCCGTCTCAATCACCATTCGTATTGTGCTTGGTTTTGTGCTTCTAGCTTTGATATGGGAATTTGATTTCCCTCCTTTCATGGTCCTGATCATCGCAATATTGAACGATGGAACCATCATGACTATTTCTAAAGATCGAGTCCGACCATCGCCAAGGCCGGATAGTTGGAAGCTCCCTGAGATCTTTGCTACAGGGATTGTCATTGGCACATATCTTGCTCTAGTTACCGTCCTATTCTACTGGTTGGTTGTGGGTACAGACTTCTTCGAGACTCGATTTCACGTAGATTCCTTGAAAAGTAACACCGAGAAAGTTGCAGCCGCTGTATATCTGCAAGTGAGCATCATCAGCCAGGCTCTCATATTCGTCACTCGTAGCCAAGGATGGTCATTTATGGAGAGGCCCGGAGCTCTCTTGATGTGTGCATTTGTGGTGGCTCAGCTGGTGGCTACCTTAATAGCAGTCTACGCAAATATAAGTTTCGCTTTTATCAACGGTATCGGGTGGGGATGGGCAGGGGTCATCTGGCTCTACAGCTTCATCTTCTACTTGCCTCTAGATGTTATCAAGTTCACAATTCGCTATATCTTGAGTGGAGAAGCTTGGAATCTTTTATTTGACAGAAAGACACTGTTTACTTCGAAGAAGGACTACGGCAGCGAAGATAGGGCAGCTAAGTGGGTGCAGTCTCAAAGAAGTCTAAAAGGGTTAGGATCATCCGCAGATTTGGAGATCAATGGTCGGCGATCGTCTTTAATCGCAGAACAGGCCAGGAGGCGAGCTGAAATAGCAAGGCTAGGAGAGATGCATACTCTGAAAGGACATATAGAATCTGTGGTGAGGCTTAAAAACTTGGACGTGGGTGTAATTCAATCTGCTCATACAGTCTAA 2856 45.52 MDEDLERPLLNPDNFNRDNIDLERLPLDEVFEQLRTSPQGLTTADAEARQLIFGMNKLEEKPENKFVKFLGFMWNPLSWVMEAAAVMAIALANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMARLAPKTKVLRDGRWQEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSSLTGESLPVTKRTGDEVYSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTIVVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPVQHRTYRNGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDKNLVEVFNKDMDKDTVVLFAARASRMENQDAIDAAIVNMLGDPKEARTNIKEVHFLPFNPVDKRTAITYVDSDGNWHRTSKGAPEQILNLCKERDAIRGKVLSIIDKFAERGLRSLGVAYQTVPERSKESLGSEWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGREKDEHEALPVDELIEKADGFAGVFPEHKYEIVRILQDKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVRPSPRPDSWKLPEIFATGIVIGTYLALVTVLFYWLVVGTDFFETRFHVDSLKSNTEKVAAAVYLQVSIISQALIFVTRSQGWSFMERPGALLMCAFVVAQLVATLIAVYANISFAFINGIGWGWAGVIWLYSFIFYLPLDVIKFTIRYILSGEAWNLLFDRKTLFTSKKDYGSEDRAAKWVQSQRSLKGLGSSADLEINGRRSSLIAEQARRRAEIARLGEMHTLKGHIESVVRLKNLDVGVIQSAHTV 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10603985 10609027 - Bma004446.1 Bma10g00701 89764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00701 951 SFLD C1.7: P-type atpase like 317 644 - -
Bma10g00701 951 CDD P-type_ATPase_H 40 846 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma10g00701 951 Gene3D - 138 222 - -
Bma10g00701 951 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 931 - -
Bma10g00701 951 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 368 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00701 951 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00701 951 PANTHER CALCIUM-TRANSPORTING ATPASE 1 931 - -
Bma10g00701 951 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
Bma10g00701 951 Pfam Cation transporter/ATPase, N-terminus 24 87 IPR004014 -
Bma10g00701 951 PRINTS H+-transporting ATPase (proton pump) signature 624 649 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00701 951 PRINTS H+-transporting ATPase (proton pump) signature 565 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00701 951 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00701 951 PRINTS H+-transporting ATPase (proton pump) signature 593 609 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00701 951 PRINTS H+-transporting ATPase (proton pump) signature 765 786 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00701 951 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Bma10g00701 951 Pfam haloacid dehalogenase-like hydrolase 331 607 - -
Bma10g00701 951 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 811 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma10g00701 951 Gene3D - 903 951 - -
Bma10g00701 951 SUPERFAMILY HAD-like 331 640 IPR036412 -
Bma10g00701 951 SFLD p-type atpase 317 644 IPR044492 -
Bma10g00701 951 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 852 IPR023298 -
Bma10g00701 951 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Bma10g00701 951 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Bma10g00701 951 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Bma10g00701 951 PRINTS P-type cation-transporting ATPase superfamily signature 593 612 - -
Bma10g00701 951 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Bma10g00701 951 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Bma10g00701 951 Pfam E1-E2 ATPase 136 314 - -
Bma10g00701 951 Gene3D - 100 819 - -
Bma10g00701 951 Gene3D - 332 630 IPR023214 -
Bma10g00701 951 Gene3D - 347 494 IPR023299 GO:0000166
Bma10g00701 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00662 Bma-Chr10:9527553 Bma10g00701 Bma-Chr10:10603985 0 wgd
Bma10g00701 Bma-Chr10:10603985 Bma13g01188 Bma-Chr13:45155670 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00701 K01535 - jre:108983058 1630.92