Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00703 ATGAAACCCGTTCAGCAACCTCCAGCCGCTACCCGCCGCCTTCGTCGGCCCGACCTGACCCTCCCACTCCCTAAACGCGACCCATTATTGGCTGTCCCTCTTCCGTTACCTCCACCCTCCAACTCAGCTCCCTCCTCCACTGCCTACCGCCACCAGTTCAGCTTCTCGGAGCTGCAGAGAATCAACCGAATCGGGAGCGGCAATGGAGGCACGGTCTACAAGGTCATTCATCGCCCAACCGGACAGCTCTATGCCCTTAAAGTCATCTACGGCAACCATGATGATTCCGTGAGGCGGCAGATCTGCCGGGAGATCGAGATTCTCCGAGGCGCGGACAATCCCTATATCGTCAAGTGCATTGATATGTTCGATCACAACGGCGAAATCCAAATCCTCCTCGAATACATGGATAAAGGTTCGTTAGAAGGGACCCATATACCTCAGGAACACCATCTATCTGATCTAGCCCGCCAGATTCTCAGTGGCCTTGCCTACCTCCATAGCCGCCGCATCGTCCACCGGGACATCAAGCCGTCTAATCTCCTAATCAACGCTCGTAAGCAGGTGAAAATCGCAGATTTCGGAGTGGGAAAGATCTTGGACCAGACGATGGATCCGTGTAACTCGGCTGTCGGAACGATTGCGTATATGAGCCCGGAGAGAATCAACTCCGATTTAAACCAGGGTCAGTACGACGGATACGCCGGTGATATTTGGAGTCTTGGAGTGAGCATTTTGGAGTTTTATTTGGGCAGGTTTCCGTTTGCGGTGGGGAGGCAAGCTGAGTGGGCGAATTTGATGTGCGCAATCTGTATGTCTCAGCCGCCGGAGGCTCCAGCCAGCGCCTCAGTCGAGTTTCGCCATTTTATTGCTTGTTGTTTGCAGAGGGAGCCTGGGAAGAGATGGAATGCTAACCAGTTGTTACAGCACGCATATATAACACAGCAAAAGCAGAACCACCACTCTACTCATCCGCTCCTCCACCATCCTCCTCCGCGATTTCAACCTCCTTAA 1014 53.35 MKPVQQPPAATRRLRRPDLTLPLPKRDPLLAVPLPLPPPSNSAPSSTAYRHQFSFSELQRINRIGSGNGGTVYKVIHRPTGQLYALKVIYGNHDDSVRRQICREIEILRGADNPYIVKCIDMFDHNGEIQILLEYMDKGSLEGTHIPQEHHLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINARKQVKIADFGVGKILDQTMDPCNSAVGTIAYMSPERINSDLNQGQYDGYAGDIWSLGVSILEFYLGRFPFAVGRQAEWANLMCAICMSQPPEAPASASVEFRHFIACCLQREPGKRWNANQLLQHAYITQQKQNHHSTHPLLHHPPPRFQPP 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10617046 10618059 - Bma004448.1 Bma10g00703 89766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00703 337 Pfam Protein kinase domain 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00703 337 MobiDBLite consensus disorder prediction 1 25 - -
Bma10g00703 337 ProSiteProfiles Protein kinase domain profile. 58 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00703 337 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Bma10g00703 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bma10g00703 337 Gene3D Transferase(Phosphotransferase) domain 1 139 327 - -
Bma10g00703 337 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 12 332 - -
Bma10g00703 337 SUPERFAMILY Protein kinase-like (PK-like) 57 334 IPR011009 -
Bma10g00703 337 Gene3D Phosphorylase Kinase; domain 1 40 137 - -
Bma10g00703 337 SMART serkin_6 58 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00703 337 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 12 332 - -
Bma10g00703 337 CDD PKc_MAPKK_plant_like 56 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00703 Bma-Chr10:10617046 Bma11g00589 Bma-Chr11:8789921 1.98E-52 dispersed
Bma10g00703 Bma-Chr10:10617046 Bma02g00241 Bma-Chr2:2518061 7.56E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66740 PF00069 Pkinase 1.10E-64 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00703 K13413 - csv:101219669 477.633