Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00706 ATGTGGAACGTTATGATGATCGGCGACGGAAAAACGAAGAGCATTGTTACCGGTAGCTTGAACTTCGTCGACGGCACACCTACTTTCTCCACACCCACTTTCGCTGCCGTAGGGAAAGGATTTATCGCCAGAGACATGGGTTTCGTCAACTCAGCAGGACCAGCCAAGCACCAGGCGGTGGCGTTCCGGTCAGGATCAGACCTTTCGGTATTCTCAGGCTGCTCATTCGATGCCTACCAAGACACCCTCTACTCCCATTCCAATCGCCAATTCTACCGTGACTGTGACATAACCGGCACTGTCGACTTCATCTTCGGAAACGCGGCTGTCGTCTTCCAAAACTGCAACATCATGCCTAGACAGCCATCAAGCAACCAGTTTAACACCATCACAGCACAGGGCAAAACAGACCCTAATCAGAACACCGGCATTTCCATCCAAAAGTGCAATCTTTCACCTCTGCTAGGTATCGTTCTCTCTGCTCAAACTTACCTCGGGAGGCCATGGAAAGCATATTCCACGACAGTCATCATGCAGTCCAGTATTGGGTCATTCCTTAACCCCTTGGGCTGGACTCCATGGTCACAAACGTCCAGCCTCCCAGCACTATCTATTACGCTGAGTATCAGAACACTGGTCCTGGCTCGTCTGTCGCCAAAAGGGTTAAGTGGTCTGGTTATAAGCCAGCTCTGA 693 50.94 MWNVMMIGDGKTKSIVTGSLNFVDGTPTFSTPTFAAVGKGFIARDMGFVNSAGPAKHQAVAFRSGSDLSVFSGCSFDAYQDTLYSHSNRQFYRDCDITGTVDFIFGNAAVVFQNCNIMPRQPSSNQFNTITAQGKTDPNQNTGISIQKCNLSPLLGIVLSAQTYLGRPWKAYSTTVIMQSSIGSFLNPLGWTPWSQTSSLPALSITLSIRTLVLARLSPKGLSGLVISQL 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10721876 10722673 + Bma004455.1 Bma10g00706 89769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00706 230 ProSitePatterns Pectinesterase signature 2. 97 106 IPR033131 -
Bma10g00706 230 Gene3D - 1 209 IPR012334 -
Bma10g00706 230 PANTHER PECTINESTERASE 1 199 - -
Bma10g00706 230 Pfam Pectinesterase 1 203 IPR000070 GO:0030599|GO:0042545
Bma10g00706 230 PANTHER PECTINESTERASE 1-RELATED 1 199 - -
Bma10g00706 230 SUPERFAMILY Pectin lyase-like 2 199 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00706 Bma-Chr10:10721876 Bma01g01544 Bma-Chr1:34984686 1.81E-95 dispersed
Bma10g00706 Bma-Chr10:10721876 Bma13g01193 Bma-Chr13:45200804 9.58E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00706 - - qsu:112001785 332.798