Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00706 | ATGTGGAACGTTATGATGATCGGCGACGGAAAAACGAAGAGCATTGTTACCGGTAGCTTGAACTTCGTCGACGGCACACCTACTTTCTCCACACCCACTTTCGCTGCCGTAGGGAAAGGATTTATCGCCAGAGACATGGGTTTCGTCAACTCAGCAGGACCAGCCAAGCACCAGGCGGTGGCGTTCCGGTCAGGATCAGACCTTTCGGTATTCTCAGGCTGCTCATTCGATGCCTACCAAGACACCCTCTACTCCCATTCCAATCGCCAATTCTACCGTGACTGTGACATAACCGGCACTGTCGACTTCATCTTCGGAAACGCGGCTGTCGTCTTCCAAAACTGCAACATCATGCCTAGACAGCCATCAAGCAACCAGTTTAACACCATCACAGCACAGGGCAAAACAGACCCTAATCAGAACACCGGCATTTCCATCCAAAAGTGCAATCTTTCACCTCTGCTAGGTATCGTTCTCTCTGCTCAAACTTACCTCGGGAGGCCATGGAAAGCATATTCCACGACAGTCATCATGCAGTCCAGTATTGGGTCATTCCTTAACCCCTTGGGCTGGACTCCATGGTCACAAACGTCCAGCCTCCCAGCACTATCTATTACGCTGAGTATCAGAACACTGGTCCTGGCTCGTCTGTCGCCAAAAGGGTTAAGTGGTCTGGTTATAAGCCAGCTCTGA | 693 | 50.94 | MWNVMMIGDGKTKSIVTGSLNFVDGTPTFSTPTFAAVGKGFIARDMGFVNSAGPAKHQAVAFRSGSDLSVFSGCSFDAYQDTLYSHSNRQFYRDCDITGTVDFIFGNAAVVFQNCNIMPRQPSSNQFNTITAQGKTDPNQNTGISIQKCNLSPLLGIVLSAQTYLGRPWKAYSTTVIMQSSIGSFLNPLGWTPWSQTSSLPALSITLSIRTLVLARLSPKGLSGLVISQL | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10721876 | 10722673 | + | Bma004455.1 | Bma10g00706 | 89769 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00706 | 230 | ProSitePatterns | Pectinesterase signature 2. | 97 | 106 | IPR033131 | - | |
Bma10g00706 | 230 | Gene3D | - | 1 | 209 | IPR012334 | - | |
Bma10g00706 | 230 | PANTHER | PECTINESTERASE | 1 | 199 | - | - | |
Bma10g00706 | 230 | Pfam | Pectinesterase | 1 | 203 | IPR000070 | GO:0030599|GO:0042545 | |
Bma10g00706 | 230 | PANTHER | PECTINESTERASE 1-RELATED | 1 | 199 | - | - | |
Bma10g00706 | 230 | SUPERFAMILY | Pectin lyase-like | 2 | 199 | IPR011050 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma10g00706 | Bma-Chr10:10721876 | Bma01g01544 | Bma-Chr1:34984686 | 1.81E-95 | dispersed | |
Bma10g00706 | Bma-Chr10:10721876 | Bma13g01193 | Bma-Chr13:45200804 | 9.58E-68 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00706 | - | - | qsu:112001785 | 332.798 |