Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00709 ATGGGTCTTGCAGTGTTTCTCACACCATCCATGTTCCTCCTGTTCTTCTTCCTCCTTTTCCTATCGCCCGCCATTGTTGTCTCTCTGAACCAAGAAGGTCTCTATTTGCGCAGCGTCAAGATGTCTCTGGATGATACAGACTCTGTTCTCTCTTCCTGGGACGACGGAGACGACACCCCTTGCTCTTGGTTTGGTGTCACCTGCGAACCTGTTGGCCGGACTGTTGTCTCCGTCGATCTTTCTGCCTCCAATCTCGCTGGCCCTTTTCCCTCCCTCCTCTGTCGCCTCCGTAACCTTTCCTTTCTTTCGCTTTACAACAACTCTATAAACTCCACCTTCCCCTCCGATGTCTCGGCCTGTCAGAACCTCCAGCACCTCAACGTCGCTCAGAATCTCCTTACTGGTACGCTTCCAGATTCCCTTTCTGATCTTCCTAACCTCCGCTATTTAGACTTCACTGGGAACAATTTTTCCGGCGGCATACCGCTCAGTTACGCTCGATTTCAGAAGCTCGAAGTTCTTTCTCTCGTTTACAATCTTCTCGACGGTGCCCTGCCTTCATTTCTCGGCAACATAACTACTCTCAAAATGCTTAATCTCTCGTACAATCCATTTATTCCTGGTCCGATTCCGGCGGAGTTTGGAAACCTAACAAATTTGGAGGTGCTATGGTTGACGCAATGTAACTTGGTCGGCGAGATTCCTGACTCACTGGGTAGACTCAAGCGACTCACAGATTTGGACTTGGCTCTTAACAACCTTCACGGTTCTATTCCGACATCTCTCACCGAGTTAACCAGTGTGGTTCAGATTGAGTTGTATAATAACTCCCTTTCCGGCCCGTTACCTCCTAGCTTTTCGAGTCTCACTGCTCTGAGATTATTCGATGCCTCAATGAACGAGTTAACTGGATCGATTCCAGACGAGTTGTGTCGGTTACCGCTCGAAAGTCTAAACCTTTACGAGAACTATTTTGAGGGGAAGCTGCCGGAAAGCATTTCGGAATCGACCGTACTGTACGAACTCAGGTTGTTCGGGAACCGACTCACAGGTGAGTTGCCGAAAAATCTTGGGAAAAATTCGCCTTTAAGATGGATAGATATATCGGACAACATGTTTTCAGGGGAGCTTCCGCCGAATCTCTGCGGGAAGGGTGAGTTAGAAGAGCTTTTGATAATTAACAACCAGTTCACCGGCGAGATCCCGGTGAGTCTGGGCGAGTGCCGGAGCTTGACCCGGGTCAGACTCGGCCACAATAGATTATCTGGTGAAATTCCGATCGGTTTTTGGGGACTTCCCCATGTGTATCTACTCGAGCTCATACACAATTCTTTTTCTGGCCCCATCGCAAAAACTATTGCCAGCGCCGGCAACCTCTCTATGCTTATTATTTCTAACAATAGCTTTGGGGGAACCATACCGGAGGAAATTGGTTGGCTGGAAAACCTGGTAGAGTTTTCTGGTGGCCATAACAAGTTCAACGGAGCCTTGCCAAACAGTATTGTGAATCTTGCTCAGCTTAGTAAGTTGGATCTTAGCAGTAACAATCTTTCCGGCAATCTTCCAGGCGGGATTAAGTCCTGGAAAAGCCTAAACGAGCTACAATTGTCAAATAACAAGCTCTCTGGAGAAGTTCCTGAAGAAATTGGCAGCTTGCCTGTGCTTAATTACCTCGATTTATCATCTAATCGGTTTTCCGGAGAAATCCCTTTGACCTTGCAGAATCTTAAGCTCGGCCTCCTCAATTTGTCAGTCAATTGTCTCTCTGGTGACCTTCCGCCATTGTTTTCCAAACAAATGTACAGAAGTAGCTTCCTGGGTAATCCCGAATTGTGTGGAGATTTGGAGGGTCTGTGTGACAGCAATAGCGAAGCAAAAAGACGGGGCTACATTTGGCTGCTTCGCTCGATTTTCACTCTTGCCGGCATAGTTTTGATTGTCGGAGTAGCTTGGTTTTACTTCAAGTACAAGAAATTCAAAAAGTCGAAAAAATCGATCGACAAGTCAAAATGGACTCTAATGTCGTTCCACAAACTGGAATTCAGCGAATTTGAGATCTTAGATTCTCTGGACGAAGACAGTGTAATAGGCAGTGGATCATCCGGGAAGGTCTACAAGGTTGTGATCAGCAATGGCGAAGCTGTTGCCGTCAAGAAAATTTGGGGAGGGGCCAAAATGGACTGCCCGAGTGACGATATCGAAAAGGGTGGAGTTCGAAACGACTGCTTTGAAGCAGAAGTCGAGACACTCGGGAAGATTCGACACAAAAACATCGTAAAACTCTGGTGTTGTTGCACCACAAAAGACTGCAAGCTATTGGTCTATGAGTATATGCCGAATGGAAGCTTGGGAGATTTACTTCACAGCAGCAAAGGAGGTCTTCTAGACTGGCCAACCCGATATAAAATCGCCTTTGACGCTGCTGAGGGGCTTTCTTATTTGCATCATGACTGTCTTCCTCCAATCGTCCATCGAGATATCAAGGCCAATAATATTTTGTTAGATGCAGAATTTGGTGCGAAAGTAGCCGATTTTGGGGTTGCCAAGGCAGTGGATTCGTCCGGTAAAGCCCCGAAATCCATGTCAGTCATTGCCGGTTCTTGTGGTTACATTGCCCCTGAATATGCATATACGCTGCGAGTGAATGAAAAGAGCGATATATACAGTTTTGGAGTTGTAATTCTCGAATTAGTAACCGGCCGGCAGCCGGTGGAGCCGGAATTTGGGGAGAAGGATTTGGTGAATTGGTTATGCACGACATTGGATCAAAAGGGAGTCGACGAAGTTATTGACAAGAAACTCGATTCTTGTTTCAAAGAAGAAATTATCAAAGTTCTCAACATAGCTCTTCTCTGCACCAGCCCACTCCCGATCAACCGGCCGTCCATGAGAAGGGTGGTCAAGTTATTGCAGGAAGTCGCCGGAGAAAGCCAGCCGAAAGTTGCTAAGAAAGACGGAAAGCTCTCTCCTTATTACTACGAAGAGGCCTCCGATCAGGGAAGTACAGCTTAA 3012 46.91 MGLAVFLTPSMFLLFFFLLFLSPAIVVSLNQEGLYLRSVKMSLDDTDSVLSSWDDGDDTPCSWFGVTCEPVGRTVVSVDLSASNLAGPFPSLLCRLRNLSFLSLYNNSINSTFPSDVSACQNLQHLNVAQNLLTGTLPDSLSDLPNLRYLDFTGNNFSGGIPLSYARFQKLEVLSLVYNLLDGALPSFLGNITTLKMLNLSYNPFIPGPIPAEFGNLTNLEVLWLTQCNLVGEIPDSLGRLKRLTDLDLALNNLHGSIPTSLTELTSVVQIELYNNSLSGPLPPSFSSLTALRLFDASMNELTGSIPDELCRLPLESLNLYENYFEGKLPESISESTVLYELRLFGNRLTGELPKNLGKNSPLRWIDISDNMFSGELPPNLCGKGELEELLIINNQFTGEIPVSLGECRSLTRVRLGHNRLSGEIPIGFWGLPHVYLLELIHNSFSGPIAKTIASAGNLSMLIISNNSFGGTIPEEIGWLENLVEFSGGHNKFNGALPNSIVNLAQLSKLDLSSNNLSGNLPGGIKSWKSLNELQLSNNKLSGEVPEEIGSLPVLNYLDLSSNRFSGEIPLTLQNLKLGLLNLSVNCLSGDLPPLFSKQMYRSSFLGNPELCGDLEGLCDSNSEAKRRGYIWLLRSIFTLAGIVLIVGVAWFYFKYKKFKKSKKSIDKSKWTLMSFHKLEFSEFEILDSLDEDSVIGSGSSGKVYKVVISNGEAVAVKKIWGGAKMDCPSDDIEKGGVRNDCFEAEVETLGKIRHKNIVKLWCCCTTKDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAFDAAEGLSYLHHDCLPPIVHRDIKANNILLDAEFGAKVADFGVAKAVDSSGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRQPVEPEFGEKDLVNWLCTTLDQKGVDEVIDKKLDSCFKEEIIKVLNIALLCTSPLPINRPSMRRVVKLLQEVAGESQPKVAKKDGKLSPYYYEEASDQGSTA 1003
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10776543 10779661 + Bma004459.1 Bma10g00709 89772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00709 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Bma10g00709 1003 ProSiteProfiles Protein kinase domain profile. 690 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00709 1003 SMART LRR_typ_2 504 527 IPR003591 -
Bma10g00709 1003 SMART LRR_typ_2 96 120 IPR003591 -
Bma10g00709 1003 SMART LRR_typ_2 217 241 IPR003591 -
Bma10g00709 1003 SMART LRR_typ_2 289 313 IPR003591 -
Bma10g00709 1003 SMART LRR_typ_2 552 575 IPR003591 -
Bma10g00709 1003 Gene3D Phosphorylase Kinase; domain 1 672 777 - -
Bma10g00709 1003 SUPERFAMILY L domain-like 339 594 - -
Bma10g00709 1003 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Bma10g00709 1003 Gene3D Transferase(Phosphotransferase) domain 1 778 995 - -
Bma10g00709 1003 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Bma10g00709 1003 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 981 - -
Bma10g00709 1003 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Bma10g00709 1003 Gene3D Ribonuclease Inhibitor 28 205 IPR032675 -
Bma10g00709 1003 Pfam Protein kinase domain 692 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00709 1003 SUPERFAMILY Protein kinase-like (PK-like) 674 970 IPR011009 -
Bma10g00709 1003 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 14 981 - -
Bma10g00709 1003 SMART serkin_6 690 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00709 1003 SUPERFAMILY RNI-like 77 383 - -
Bma10g00709 1003 Gene3D Ribonuclease Inhibitor 315 622 IPR032675 -
Bma10g00709 1003 Gene3D Ribonuclease Inhibitor 206 314 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00096 Bma-Chr2:841950 Bma10g00709 Bma-Chr10:10776543 6.27E-103 dispersed
Bma04g01004 Bma-Chr4:16648805 Bma10g00709 Bma-Chr10:10776543 1.43E-08 dispersed
Bma04g01005 Bma-Chr4:16659051 Bma10g00709 Bma-Chr10:10776543 5.55E-113 dispersed
Bma07g00406 Bma-Chr7:4940273 Bma10g00709 Bma-Chr10:10776543 0 dispersed
Bma09g00155 Bma-Chr9:5397708 Bma10g00709 Bma-Chr10:10776543 0 dispersed
Bma10g00709 Bma-Chr10:10776543 Bma15g01094 Bma-Chr15:43526502 0 dispersed
Bma10g00709 Bma-Chr10:10776543 Bma15g01096 Bma-Chr15:43629790 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66741 PF00069 Pkinase 1.20E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00709 - - zju:107412010 1478.38