Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00734 ATGGCAAATGATCTTCAGGGTCAGGGCACTGACTTTCCCAATTTTCCCATGCATAGAAATTGTGATCATTATTCATCAGAAAATGGCAGAGGAGAGTCAGAAATCGAACTCGAGAGTGTAATAACTTCCAGTGATGGAAAGGATCAGAAACCTGCCATTAAGGGTTTTGGTTTTGAGGATAGTCGCCTCATGGATAGCAATTGGCTGAAAGAGCCCAATCCTCGTGTCATTTTGTTATTTTTCCGTATACTAGCGGTTTGTCATACTGCAATTCCAGAGCATAATGAAGAGAATGGTGGCTTGACTTATGAAGCTGAGTCACCTGATGAAGGTGCCTTTCTCGTTGCAGCAAGAGAATTTGGTTTTGAGTTTTGTAAAAGAACTCAAACAAGCTTGATTGTCCGTGAAAGATATTGTACTTCCAAACAAGCAGTTGAGAGGGAGTACAAAATTCTTAACCTCTTGGATTTCACCAGTACGAGGAAGCGAATGACTGTTATTGTGCGGGACGAAGATGGGCAGATTCTTGTTTTTTGCAAAGGGGCTGACAGCATCATTTTTGATCGATTAGCAAAGAACGGACGAATGTACCAAGATGTAACCACTAAGCATTTGAATGAGTATGGAGAAGCTGGGTTGAGGACACTAGCTCTAGCTTACAGAAAACTGGATGAATCAGAGTACTCTGCTTGGAACAGTGAATTTCTGAAAGCCAAAACATCAATTGGTGGTGATAGGGATGCAATGCTTGAGCAGGTATCAGATATGATCGAGAGGGAGTTTATTCTAGTTGGTGCTACAGCTGTGGAGGATAAGTTGCAAAAAGGGGTGCCCCAGTGTATAGATAAACTCGCTCAAGCTGGCCTCAAGATCTGGGTTTTGACAGGGGACAAGATGGAAACTGCTATCAATATTGGCTTTGCTTGCAGTTTGCTAAGACAGGGCATGAAGCAGATATGCATAACCACTAATTCAGACATATTAGCTCAGGAGGGCAATGAGGCAGTGAAAGCAAACATTTTAAACCAAATCACCAATGCCTCACAAACGATCAAGCTGGAGAAGGATCCGCATGCTGCATTTGCTTTAATTATTGATGGGAAGACCTTAACCTATGCTTTGGAAAATGATATGAAGCATAAATTTCTGAGATTGGCCGTTGATTGCGCTTCTGTTATTTGTTGTCGTGTATCTCCTAAGCAGAAGGCGATGGTAACTAGGTTAGTGAAAGAAGGTACAGGGAGAACCACATTAGCGATTGGTGATGGTGCAAACGATGTTGGAATGATCCAAGAGGCTGATATTGGCGTCGGGATTAGTGGTGTAGAAGGTATGCAGGCAGTGATGGCTAGCGACTTTTCCATCGCTCAGTTCCGGTTTTTGGAGAGACTTCTCGTTGTCCATGGACATTGGTGCTACAAGAGGATTGCTCAGATGATTTGCTATTTCTTCTACAAGAATATAGCATTTGGACTTACCCTCTTCTACTTCGAGGCATTCACCGGGTTTTCTGGGCAATCAATTTACGACGACTATTATATGCTTTCGTTTAATGCGATTCTTACCTCATTGCCTGTCATCTCACTTGGAGTTTTCGAACAAGACGTTCCATCCGAGGTCTGCCTACAGTTCCCTGCACTGTATCAACAAGGACCGAAAAACTTGTTCTTCGACTGGCCTAGAATATTCGGGTGGATGGGAAACGGTCTTTATTCCTCTCTCATCACTTTCTTCCTCAACGTAATCATCTTCTACGATCAAGCTTTTCGAGCTGGAGGCCAGACTGCGGACATGGCAGCAGTGGGCACGACAATGTTCACTTGCATAATCTGGGCTGTAAATTGCCAAATCGCTTTCACAATGAGCCACTTCACGTGGATCCAACACCTTCTCATCTGGGGCAGCATCGCCATGTGGTATCTCTTCATCTTGCTCTACGGCACCATGATCATCTCTGGAAATGCCTACAAAATTCTCGTCGAGGCTCTGGCTCCCGCCCCTGTCTTCTGGACCACAACTTTATTGGTAACAATCGCATGTAACCTCCCTTACTTTGCCCACATTTCCTACCAGAGATGTTTCAACCCAATGGATCATCACATCATCCAAGAAATCAAATACTACAAGAAAGACGTGCAAGATCAGCTAATGTGGACCCGTGAAAGTTCGAAAGCACGGCAAGAAACAAAGATCGGATTTACAGCACGGGTCGACGCAAAGATCCGGCAGTTGAGGGGGAGGCTGCAGAAGAAGCACTCGACTTTGAGCATATAA 2274 44.2 MANDLQGQGTDFPNFPMHRNCDHYSSENGRGESEIELESVITSSDGKDQKPAIKGFGFEDSRLMDSNWLKEPNPRVILLFFRILAVCHTAIPEHNEENGGLTYEAESPDEGAFLVAAREFGFEFCKRTQTSLIVRERYCTSKQAVEREYKILNLLDFTSTRKRMTVIVRDEDGQILVFCKGADSIIFDRLAKNGRMYQDVTTKHLNEYGEAGLRTLALAYRKLDESEYSAWNSEFLKAKTSIGGDRDAMLEQVSDMIEREFILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTNSDILAQEGNEAVKANILNQITNASQTIKLEKDPHAAFALIIDGKTLTYALENDMKHKFLRLAVDCASVICCRVSPKQKAMVTRLVKEGTGRTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSIYDDYYMLSFNAILTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWPRIFGWMGNGLYSSLITFFLNVIIFYDQAFRAGGQTADMAAVGTTMFTCIIWAVNCQIAFTMSHFTWIQHLLIWGSIAMWYLFILLYGTMIISGNAYKILVEALAPAPVFWTTTLLVTIACNLPYFAHISYQRCFNPMDHHIIQEIKYYKKDVQDQLMWTRESSKARQETKIGFTARVDAKIRQLRGRLQKKHSTLSI 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11610621 11613817 - Bma004494.1 Bma10g00734 89797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00734 757 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 40 704 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bma10g00734 757 Pfam Phospholipid-translocating P-type ATPase C-terminal 448 696 IPR032630 -
Bma10g00734 757 Pfam Cation transport ATPase (P-type) 86 190 - -
Bma10g00734 757 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 17 757 - -
Bma10g00734 757 SUPERFAMILY Calcium ATPase, transmembrane domain M 469 688 IPR023298 -
Bma10g00734 757 SUPERFAMILY HAD-like 258 468 IPR036412 -
Bma10g00734 757 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 17 757 - -
Bma10g00734 757 CDD P-type_ATPase_APLT_Dnf-like 80 579 - -
Bma10g00734 757 Gene3D - 126 239 IPR023299 GO:0000166
Bma10g00734 757 Gene3D - 260 460 IPR023214 -
Bma10g00734 757 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 59 226 IPR023299 GO:0000166
Bma10g00734 757 MobiDBLite consensus disorder prediction 1 21 - -
Bma10g00734 757 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 392 501 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00734 Bma-Chr10:11610621 Bma14g01495 Bma-Chr14:30220082 0 dispersed
Bma10g00734 Bma-Chr10:11610621 Bma13g01228 Bma-Chr13:45525357 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00734 K01530 - csv:101221220 1285.78