Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00748 ATGAATCGGGAACAGAAGCAAGAGAAAGGCTCTGGCGCCGCCGGAAAAGTGGTCGTTGCCGTGAGAGAGTCTAAGGAAATTCCGAAGAGTGCCTTGGTTTGGGCGTTGACTCACGTCGTGCAACCAGGGGATTGCATAACTCTTCTCGTAGTTGTCCCCTCTCAAAGCTCTGGTAGAAAACTGTGGGGTTTACCAAGATTTGCTGGGGATTGTGCCAATGGTCACAAAAAGTCACATTTAGGAGCAAGCCCCGACCAAACATACGATATTACGGATTCATGCTCCCAGATGATCCTTCAACTTCATGATGTTTATGATCCAGATAAGATCAATGTTGAGATAAAGATTATATCCGGGTCTCCTATTGGGGGAGTGGCTTTAGAAGCCAAGAGAGCTCATGCCAGTTGGATTGTGTTAGACAAGCAGCTTAAAAACGAGGAGAAGCGTTGCATGGAAGAGCTGCAATGCAACATTGTGGTCATGAAGCGTTCCCTGCCGAAAGTTCTTCGCTTGAGTTTGGTCGGTTCGCCTAAAAACGAACCTGAAGTGGTTTCTCCTTTATGTTCTGATCCAGATGAAGGGACTGAAAATACTCATGGAAAAAAGCATTCTTTCCCTACCATTCGCGGTCCTTTAGTAACTCCAAATAGCAGCCCTGAGCTAGGTACTCCATTTACTGCCACTGAAGCCGGGACTTCATCAGTGTCAAGCTCGGGTCAGGGAACATCGCCTTTTTTCATTTCCAAAATGATTGGAGATCCGAAAAAAGAGGAATCCCTAGTAATCAAGGAGAACAAAGAACTTGATTGTGCAAGTTCAGACTCAGACTGTGAGAATGTCTCAATAATATCGTCGACAAGTATGAGATTCCAACCTTGGATGATAGAATTTATTAGATCTCATTATAGACCCTTGCAACACGAGAACGGGATGTCACATAGATGTGAAGATAAGCTTCAAGAATCAACTAGCAAAATTTTGGAACGATTGCAAAACAACAGAAATAATGCCGAATTTAGTGGTAATGTCAGAGATGCTGTCTCCTTGTCCAGAACTATGCCTCTCGGGCCCCCGCCGTTGTGTTCAATATGCCAACATAAAGCACCTGTTTTTGGAAAACCTCCAAGGCGGTTCGGCTATGCTGAGCTGGAGGCTGCGACTGGTGGATTTTCTCAGGCCAATTTCTTGGCGGAAGGAGGGTTTGGATCGGTTCACAGAGGAGTTCTACCTGATGGTCAAATAGTTGCTGTCAAGCAACATAAACTTGCCAGTTCTCAAGGAGACCTCGAGTTTTGTTCGGAAGTGGAAGTCCTCAGCTGTGCTCAGCATCGGAATGTCGTTATGCTGATTGGCTACTGCATTGAGGACAAAAGAAGGTTACTTGTGTATGAATATATCTGCAATGGATCATTGGATTCTCATCTATATGGACCGCAACGAGTACCGTTAGAATGGTCTGCACGACAAAAAATTGCAGTAGGAGCGGCTCGAGGACTGCGATATCTTCACGAAGAATGTAGAGTAGGCTGCATTGTTCACCGCGACGTGCGACCAAATAACATTCTTATCACTCATGATTTTGAACCTCTGGTTGGAGACTTTGGCCTTGCAAGATGGCAGCCAGACGGAGATAAGGGCGTGGAGACGAGAGTAATTGGAACTTTTGGGTATTTGGCTCCCGAGTACGCACAAAGTGGCCAAATCACAGAAAAGGCGATGTTTACTCCTTTGGTGTCGTGTTGGTGGAGCTAA 1752 45.66 MNREQKQEKGSGAAGKVVVAVRESKEIPKSALVWALTHVVQPGDCITLLVVVPSQSSGRKLWGLPRFAGDCANGHKKSHLGASPDQTYDITDSCSQMILQLHDVYDPDKINVEIKIISGSPIGGVALEAKRAHASWIVLDKQLKNEEKRCMEELQCNIVVMKRSLPKVLRLSLVGSPKNEPEVVSPLCSDPDEGTENTHGKKHSFPTIRGPLVTPNSSPELGTPFTATEAGTSSVSSSGQGTSPFFISKMIGDPKKEESLVIKENKELDCASSDSDCENVSIISSTSMRFQPWMIEFIRSHYRPLQHENGMSHRCEDKLQESTSKILERLQNNRNNAEFSGNVRDAVSLSRTMPLGPPPLCSICQHKAPVFGKPPRRFGYAELEAATGGFSQANFLAEGGFGSVHRGVLPDGQIVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGYCIEDKRRLLVYEYICNGSLDSHLYGPQRVPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDVRPNNILITHDFEPLVGDFGLARWQPDGDKGVETRVIGTFGYLAPEYAQSGQITEKAMFTPLVSCWWS 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11821441 11824076 - Bma004511.1 Bma10g00748 89811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00748 583 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 13 572 - -
Bma10g00748 583 Gene3D Transferase(Phosphotransferase) domain 1 466 572 - -
Bma10g00748 583 MobiDBLite consensus disorder prediction 180 239 - -
Bma10g00748 583 Gene3D Phosphorylase Kinase; domain 1 362 465 - -
Bma10g00748 583 Pfam Protein kinase domain 394 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00748 583 ProSitePatterns Tyrosine protein kinases specific active-site signature. 511 523 IPR008266 GO:0004672|GO:0006468
Bma10g00748 583 MobiDBLite consensus disorder prediction 210 239 - -
Bma10g00748 583 CDD USP_Like 16 139 - -
Bma10g00748 583 ProSiteProfiles Protein kinase domain profile. 390 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00748 583 PANTHER OS01G0253100 PROTEIN 13 572 IPR045271 GO:0004714|GO:0006468
Bma10g00748 583 SUPERFAMILY Protein kinase-like (PK-like) 375 571 IPR011009 -
Bma10g00748 583 SMART tyrkin_6 390 583 IPR020635 GO:0004713|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00748 Bma13g01236 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00748 Bma-Chr10:11821441 Bma05g00474 Bma-Chr5:17633591 3.66E-70 dispersed
Bma10g00758 Bma-Chr10:12142001 Bma10g00748 Bma-Chr10:11821441 0 transposed
Bma10g00748 Bma-Chr10:11821441 Bma13g01236 Bma-Chr13:45626188 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66743 PF00069 Pkinase 1.60E-31 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00748 - - csv:101206876 880.937