Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00751 ATGGAGTTTACTTGCTCTGTCTTTCTCTTTCTTCTCTCTTTCTGTCTGAGAATTCTCCATGGTGTATCACAGAACGAATCCACCCCACTTCCGGTGAGAGTAGGAGTTGTTCTTGACTCTGATACCCACTTTGGGAAGATTGGTTTGAGCTGTATCAAAATGGCTCTGTCTGACTTTTATGCCTCCAATGGTTCCTCCTACAAAACTAGGCTGGTTTTGTACCCTAGAAACTCTCAGATGGATAATGTTGCTGCAGCCTCTGCAGCCCTGGACTTGATAAAGAACATACAAGTAGACGCCATTATAGGGCCACAGACCTCGATGCAGGCCAAGTTCGTGATCGAACTGGGAGACAAAGCTCAAGTTCCCATCATCTCCTTTTCTGCAACCAGCCCATCTCTTTGTTCCATCCGAAGCTCATACTTTTTCCAAGCTTTCCAAAGCGACTTGTCACAAGTGAAATCCATCAGTGCTCTTGTCGAAACATTTAGATGGAGACGAGTTGTTTTGATCTACGTTGGTAACGACTATGGAGAAGGCATTATTCCCTTCCTAACAGATGCTTTGCAAGACGCTAACACTCGTGTTTCTTACCGAAGCGTGATTTCACATTTTGCGACTGATGATCAGATTGTGAATGAACTTTACAAGTTGATGACGATGCAAACCAGAGTGTTCATTGTTCATATGCTTCCTTCTCTGGGAGCTCGAATTTTCACGAAAGCGAAAGAGACTGGAATGATGAGAAAAGGGTATGTCTGGATTCTCACAAATGGGATGAGTAATCTTCTAACCCAGATTGATTCTTCCGTGCTTCAATCAATGGATGGTGTTTTGGGAGTGAAAACGTACATTCCAAAAACAGAGGACCTTAAAAACTTCGAACTCAGATGGAAAAGGGCTTTCGAACAGGAAAATCCGAGCATCTCCGGCGCTGAACTGAGTGTTTTTGGGATATGGGCTTATGATGCTACTCTAGCATTAGCCACGGCGGTCGAGAAGCTGGGGAGAGGTGGGGATTTCGGCTTCTTCAAACCAAATGGCTCATCCGATCTCGACTCTTTTGGGGTCTCTCTAAATGGTCCGATGCTTCGCAGCGCTTTAGCAGATTCAACTTTTACAGGGGAGTTTAAGCTCGCTAATGGGAGATTACAATCGCCCACTTTCAAGATAATCAACCTTAACGGGAACAGCGAAAGAAAGATCGGATTTTGGACCCCGCAAGCGGGATTCAGAAAGACTTTTGACGATTCCACGAACACAAACACAACCACATACTCTATTTCCAGATCCAATCTACGCCCAATTATCTGGGCAGGAGACTCTACTGAAGTTCCGAAAGGTTGGGAGGTGCCGACAAATGAGAAGAAGCTAAGAATAGGAATTCCAGTCAAATATGGAGTTAGTAAGTTCATTCGAATGATTCAGGATCCCGAAACGAACGCCACCAAGGTGACTGGATACAGTATTGAGGTCTTTGAAGCAGTAATGGCGGCGTTGCCCTACGCTGTTGTTTACGACTTCTTCCCCTTCGCAAATGCGAATGGAAATAGTGCTGGGAGTTACGATGATTTGGTCTATCAAGTTTTTCTCGGGAAGTATGATGCTGCGGTGGGAGATATAACCATAAGAGCAAATAGATCATTGCATGTAGACTTCACATTGCCATACACTGAATCAGGAGTTTCAATGGTGGTGCCAGTTAGAGATAGTAGTAAGAGCAAAAGAGCTTGGCTTTTCTTGAAGCCACTGACGTGGGATCTCTGGGTGACGATCCTCTGTTTCTTCGTGTTCATCGGCTTCGCTGTCTGGGTTCTGGAACACAAGATCAACGACGAATTCAGAGGGTCCCCCTCCCGTCAAGTTGGGACGAGCTTCTGGTTTTCTTTCTCGGCCACTGTTTTCGCGCAGAAGGAGAAAGTTTACAGCAACCTCGCCAGATTCGTGGTGGTGTTATGGGTGTTCGTCGTTTTCATACTGGTTCAGAGTTATACAGCCAGCCTGACTTCGTTCTTGACAGTCCAGCGACTGAATCCAGCTTATACGAACGTAAATGAGCTGCTGAAGAGTAGGGAGATGGTAGGCTACCCTAATCGTTCTTTCGTATTTCAGTTGTTGAAGGATCTGGGATTTCATGAATCCAACCTTATACCTTATAACACAATGGCGCAATGCCACGAATTGCTCGACAGCGGCGCCATTGTTGCTGCTGTTGATGAAATTCCGTACATTAAGGTTCTTGTTTCAAGTTTCTGCTCGCAATACAAAGTGACGGGGCCAGTGGCCAGAGCTGACGGATTTGGATTTGTCTTCCCTAAGAATTCCTCTCTGGTGGCTGACGTTTCGAGGGCGATACTCAAATTGAACGAAGGAGGGAAGATGGAAGAAATCGAGAAGAAATGGTTCGCAGCAAATGAAAACTGCCCAGACCCGAGTTCTTTGGTGTCCATGACTCTCGACATTCACAGCTTCTCGGGACTATTTCTCATAGCTGGTCTCGTATCGCTAGCTTCGCTCATCCTCTTCGTCGCCATGTTCTTTCTCAGTCATAAGCATCTGTTACAGAACTCAGCTGAAGAAGACTCATCAGTCTGGGGCAAATTCGTTCTTCTCTTGAGAACCTTCAACCAGAAAGACCACACATTGCGTTCTTTCAGAGACACGGACAGCAACGGCATCAATTCCTGCGACCAGATTGAGGATGTTTCAACCAAAGACTACCCTCCGACTCCATCAGCCCATTCTCCCCGGAATGATTCAGAGTTCACCTTCTCTACTACGGGGCAAGACGATCAACACGAGATTACCCTTTCAGACACCGATCTGTTAACCATGTTAAACGGCGACGGAGCAGAATCGAACGAAATTGCCCAAGAAAACACCGACCCTCCTCAAATCCACAGCACAATACCTTCTCCAAACTACTAG 2928 45.97 MEFTCSVFLFLLSFCLRILHGVSQNESTPLPVRVGVVLDSDTHFGKIGLSCIKMALSDFYASNGSSYKTRLVLYPRNSQMDNVAAASAALDLIKNIQVDAIIGPQTSMQAKFVIELGDKAQVPIISFSATSPSLCSIRSSYFFQAFQSDLSQVKSISALVETFRWRRVVLIYVGNDYGEGIIPFLTDALQDANTRVSYRSVISHFATDDQIVNELYKLMTMQTRVFIVHMLPSLGARIFTKAKETGMMRKGYVWILTNGMSNLLTQIDSSVLQSMDGVLGVKTYIPKTEDLKNFELRWKRAFEQENPSISGAELSVFGIWAYDATLALATAVEKLGRGGDFGFFKPNGSSDLDSFGVSLNGPMLRSALADSTFTGEFKLANGRLQSPTFKIINLNGNSERKIGFWTPQAGFRKTFDDSTNTNTTTYSISRSNLRPIIWAGDSTEVPKGWEVPTNEKKLRIGIPVKYGVSKFIRMIQDPETNATKVTGYSIEVFEAVMAALPYAVVYDFFPFANANGNSAGSYDDLVYQVFLGKYDAAVGDITIRANRSLHVDFTLPYTESGVSMVVPVRDSSKSKRAWLFLKPLTWDLWVTILCFFVFIGFAVWVLEHKINDEFRGSPSRQVGTSFWFSFSATVFAQKEKVYSNLARFVVVLWVFVVFILVQSYTASLTSFLTVQRLNPAYTNVNELLKSREMVGYPNRSFVFQLLKDLGFHESNLIPYNTMAQCHELLDSGAIVAAVDEIPYIKVLVSSFCSQYKVTGPVARADGFGFVFPKNSSLVADVSRAILKLNEGGKMEEIEKKWFAANENCPDPSSLVSMTLDIHSFSGLFLIAGLVSLASLILFVAMFFLSHKHLLQNSAEEDSSVWGKFVLLLRTFNQKDHTLRSFRDTDSNGINSCDQIEDVSTKDYPPTPSAHSPRNDSEFTFSTTGQDDQHEITLSDTDLLTMLNGDGAESNEIAQENTDPPQIHSTIPSPNY 975
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11972624 11975945 - Bma004516.2 Bma10g00751 89814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00751 975 MobiDBLite consensus disorder prediction 946 975 - -
Bma10g00751 975 PIRSF IGluLR_plant 2 939 IPR017103 -
Bma10g00751 975 Gene3D - 578 701 - -
Bma10g00751 975 MobiDBLite consensus disorder prediction 951 975 - -
Bma10g00751 975 Pfam Bacterial extracellular solute-binding proteins, family 3 482 803 IPR001638 -
Bma10g00751 975 Pfam Receptor family ligand binding region 51 397 IPR001828 -
Bma10g00751 975 Pfam Ligand-gated ion channel 804 833 IPR001320 GO:0015276|GO:0016020
Bma10g00751 975 Gene3D - 748 810 - -
Bma10g00751 975 Gene3D - 358 456 - -
Bma10g00751 975 SUPERFAMILY Periplasmic binding protein-like I 31 449 IPR028082 -
Bma10g00751 975 CDD PBP1_GABAb_receptor_plant 33 411 IPR044440 -
Bma10g00751 975 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 899 - -
Bma10g00751 975 SMART GluR_14 459 804 IPR001320 GO:0015276|GO:0016020
Bma10g00751 975 MobiDBLite consensus disorder prediction 899 931 - -
Bma10g00751 975 Gene3D - 457 577 - -
Bma10g00751 975 Gene3D - 150 315 - -
Bma10g00751 975 PANTHER GLUTAMATE RECEPTOR 2.9 31 899 - -
Bma10g00751 975 SUPERFAMILY Periplasmic binding protein-like II 436 803 - -
Bma10g00751 975 MobiDBLite consensus disorder prediction 908 931 - -
Bma10g00751 975 CDD GluR_Plant 456 802 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00901 Bma-Chr1:8575762 Bma10g00751 Bma-Chr10:11972624 2.78E-162 dispersed
Bma02g00212 Bma-Chr2:2275218 Bma10g00751 Bma-Chr10:11972624 2.83E-68 dispersed
Bma08g00666 Bma-Chr8:41152371 Bma10g00751 Bma-Chr10:11972624 1.17E-08 dispersed
Bma10g00751 Bma-Chr10:11972624 Bma12g00800 Bma-Chr12:37363190 7.17E-126 dispersed
Bma10g00751 Bma-Chr10:11972624 Bma02g00328 Bma-Chr2:4485146 3.31E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00751 K05387 - twl:120005286 1015.37