Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00757 ATGACCAGCAATTTCAAGAGAGTGTTGGGAGAAGGAGGGTTCGGAAAAGTTTATTACGGCCAGATCGAAAGTAACGACACTGAAGTCGCCGTCAAAATGCTCTCTTTGTCGTCCAGCCAAGGCTATCAGCAATTTCAGGCCGAGGTGGAGCTTCTTATGAGAGTTCATCACAGAAACTTGATCAGCCTCGTCGGATACTGCAACGAAGGGCAGCACATGGGGCTCATCTATGAATACATGAGCAGAGGCAATCTAGGCTCTCTGTTGGCCGGTGAAAAGGCAAGTTTTTTGACGTGGGAAAGAAGGCTGCATATAGCACTAGATGCAGCACAAGGATTGGAGTATCTGCATAATGGTTCCAGGCCAGCCATGGTGCACAGAGACGTCAAATGTGCAAACATCTTGCTAAACGATATTTTCCAAGCAAAACTTGCTGATTTTGGCCTGTCTAGATCCTTCCCGACCGAGGGTGGTGCCACCCACATCACCACCAATGTCGTCGGAACTCCGGGCTACCTCGATCCCGAGTGA 531 49.34 MTSNFKRVLGEGGFGKVYYGQIESNDTEVAVKMLSLSSSQGYQQFQAEVELLMRVHHRNLISLVGYCNEGQHMGLIYEYMSRGNLGSLLAGEKASFLTWERRLHIALDAAQGLEYLHNGSRPAMVHRDVKCANILLNDIFQAKLADFGLSRSFPTEGGATHITTNVVGTPGYLDPE 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12090492 12091167 - Bma004521.1 Bma10g00757 89820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00757 176 Gene3D Transferase(Phosphotransferase) domain 1 81 176 - -
Bma10g00757 176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bma10g00757 176 Gene3D Phosphorylase Kinase; domain 1 9 80 - -
Bma10g00757 176 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 1 176 - -
Bma10g00757 176 Pfam Protein tyrosine and serine/threonine kinase 5 154 IPR001245 GO:0004672|GO:0006468
Bma10g00757 176 PANTHER OS07G0107800 PROTEIN-RELATED 1 176 - -
Bma10g00757 176 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bma10g00757 176 SMART serkin_6 3 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00757 176 ProSiteProfiles Protein kinase domain profile. 3 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00757 176 SUPERFAMILY Protein kinase-like (PK-like) 5 176 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00757 Bma-Chr10:12090492 Bma06g00842 Bma-Chr6:42734910 1.62E-70 dispersed
Bma10g00757 Bma-Chr10:12090492 Bma13g01242 Bma-Chr13:45752494 1.75E-113 wgd
Bma10g00757 Bma-Chr10:12090492 Bma15g00346 Bma-Chr15:3440211 1.43E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66744 PF07714 PK_Tyr_Ser-Thr 5.60E-37 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00757 - - bhj:120079728 265.003