Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00758 | ATGAATCGGGAACAGAAGCAAGAGAAAGGCTCTGGCGCCGCCGGAAAAGTGGTCGTTGCCGTGAGAGAGTCTAAGGAAATTCCGAAGAGTGCCTTGGTTTGGGCGTTGACTCACGTCGTGCAACCAGGCGATTGCATAACTCTTCTCGTAGTTGTCCCCTCTCAAAGCTCTGGTAGAAAACTGTGGGGTTTACCAAGATTTGCTGGGGATTGTGCCAATGGTCACAAAAAGTCACATTTAGGAGCAAGCCCCGACCAAACATACGATATTACGGATTCATGCTCCCAGATGATCCTTCAACTTCATGATGTTTATGATCCTGATAAGATCAATGTTGAGATAAAGATTATATCCGGGTCTCCTATTGGGGGAGTGGCTTTAGAAGCCAAGAGAGCTCATGCCAGTTGGATTGTGTTAGACAAGCAGCTTAAAAACGAGGAGAAGCGTTGCATGGAAGAGCTGCAATGCAACATTGTGGTCATGAAGCGTTCCCAGCCAAAAGTTCTTCGCTTGAGTTTGGTCGGTTCACCTAAAAACGAACCTGAAGTGGTTTCTCCTTTATGTTCTGATCCAGAAGAAGGGACTGAAAATAATCATGGAAAAAAGCATTCTTTCTGTACTATTCGCGGTCCTTTAGTAACTCCAAATAGCAGCCCTGAGCTAGGTACTCCATTTACTGCCACTGAAGCCGGGACTTCATCAGTGTCAAGCTCGGGTCAGGGAACATCGCCTTTTTTCATTTCCGAAATGATTGGAGATCCGAAAAAAGAGGAATCCCTAGTAATCAAGGAGAACAAAGAGCTTGATTGTGCAAGTTCAGACTCAGACTGTGAGAATGTCTCAATAATATCATCGACAAGTATGAGATTCCAACCTTGGATGATAGAATTTATTAGATCTCATTATAGACCCTTGCAACACGAGAACGGGATGTCACATAGATGTGAAGATAAGTTTCAAGAATCAACTAGCAAAATTTTGGAACGAATGCAAAACAACAGAAATAATGCGGAATTTAGTGGTAATGTCAGAGAAGCTGTCTCCTTGTCCAGAACTATGCCTCTCGGGCCCCCGCCGTTGTGTTCAATATGCCAACATAAAGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCGGCTATGCTGAGCTGGAGGTTGCGACTGGTGGATTTTCTCAGGCCAATTTCTTGGCGGAAGGAGGGTTTGGATCGGTTCACAGAGGAGTTCTACCTGATGGTCAAGCAGTTGCTGTCAAGCAACATAAACTTGCCAGTTCTCAAGGAGACCTCGAGTTTTGTTCGGAAGTGGAAGTCCTCAGCTGTGCTCAGCATCGGAATGTCGTTATGCTGATTGGCTACTGCATTGAGGACAAAAGAAGGTTACTTGTGTATGAATATATCTGCAATGGATCATTGGATTCTCATCTATATGGACCGCAACGAGTACCGTTAGAATGGTCTGCACGACAAAAAATTGCTCTAGGAGCTGCTCGAGCACTGCGATATCTTCACGAAGAATGTAGAGTAGGCTGCATTGTTCACCGTGACATGCGACCAAATAACATTCTTATCACTCATGATTTTGAACCTCTGGTTGGAGACTTTGGCATTGCAAGATGGCAGCCAGACGGAGACAAGGGCATGGAAACTAGAGTAGTAATCGGAACTTTTGGGTATTTGGCTCCCGAGTACGCACAAAGTGGCCAAATCACAGAAAAGGCGGATGTTTACTCCTTCGGTGTCGTGTTGGTGGAGCTAATCACCGGAAGAAAAGCAGTGGATCTCAACCGGCCAAATGGCCAACAGTGCCTCACTGAGTGGTCACGGCCATTGTTGGAAGATTTAGCCATTCATGATCTGATTGATCTAAGATTGGGGAGTGCATATTCAGAGCGTGAAGTTTACTGCATGCTTCATGCGGCATTGTTGTGCATACAGAGGGACCCTAATGCTCGGCCCAGCATGTCTCAGGTGAGAAAAATATCGGTACATTTCACGGAATAA | 2001 | 45.43 | MNREQKQEKGSGAAGKVVVAVRESKEIPKSALVWALTHVVQPGDCITLLVVVPSQSSGRKLWGLPRFAGDCANGHKKSHLGASPDQTYDITDSCSQMILQLHDVYDPDKINVEIKIISGSPIGGVALEAKRAHASWIVLDKQLKNEEKRCMEELQCNIVVMKRSQPKVLRLSLVGSPKNEPEVVSPLCSDPEEGTENNHGKKHSFCTIRGPLVTPNSSPELGTPFTATEAGTSSVSSSGQGTSPFFISEMIGDPKKEESLVIKENKELDCASSDSDCENVSIISSTSMRFQPWMIEFIRSHYRPLQHENGMSHRCEDKFQESTSKILERMQNNRNNAEFSGNVREAVSLSRTMPLGPPPLCSICQHKAPVFGKPPRWFGYAELEVATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGYCIEDKRRLLVYEYICNGSLDSHLYGPQRVPLEWSARQKIALGAARALRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGIARWQPDGDKGMETRVVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNRPNGQQCLTEWSRPLLEDLAIHDLIDLRLGSAYSEREVYCMLHAALLCIQRDPNARPSMSQVRKISVHFTE | 666 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 12142001 | 12144962 | + | Bma004524.1 | Bma10g00758 | 89821 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00758 | 666 | Pfam | Protein kinase domain | 394 | 658 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma10g00758 | 666 | Gene3D | Transferase(Phosphotransferase) domain 1 | 466 | 665 | - | - | |
Bma10g00758 | 666 | SUPERFAMILY | Protein kinase-like (PK-like) | 374 | 659 | IPR011009 | - | |
Bma10g00758 | 666 | PANTHER | OS01G0253100 PROTEIN | 13 | 660 | IPR045271 | GO:0004714|GO:0006468 | |
Bma10g00758 | 666 | MobiDBLite | consensus disorder prediction | 181 | 242 | - | - | |
Bma10g00758 | 666 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 511 | 523 | IPR008266 | GO:0004672|GO:0006468 | |
Bma10g00758 | 666 | Gene3D | Phosphorylase Kinase; domain 1 | 362 | 465 | - | - | |
Bma10g00758 | 666 | CDD | USP_Like | 16 | 139 | - | - | |
Bma10g00758 | 666 | PANTHER | KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN | 13 | 660 | - | - | |
Bma10g00758 | 666 | ProSiteProfiles | Protein kinase domain profile. | 390 | 664 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma10g00758 | 666 | CDD | STKc_IRAK | 396 | 657 | - | - | |
Bma10g00758 | 666 | MobiDBLite | consensus disorder prediction | 210 | 242 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00880 | Bma-Chr1:8255810 | Bma10g00758 | Bma-Chr10:12142001 | 1.84E-91 | dispersed | |
Bma04g00192 | Bma-Chr4:1714569 | Bma10g00758 | Bma-Chr10:12142001 | 7.72E-163 | dispersed | |
Bma10g00758 | Bma-Chr10:12142001 | Bma13g01236 | Bma-Chr13:45626188 | 0 | dispersed | |
Bma10g00758 | Bma-Chr10:12142001 | Bma10g00748 | Bma-Chr10:11821441 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66745 | PF00069 | Pkinase | 1.50E-40 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00758 | - | - | zju:107404004 | 1013.83 |