Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00758 ATGAATCGGGAACAGAAGCAAGAGAAAGGCTCTGGCGCCGCCGGAAAAGTGGTCGTTGCCGTGAGAGAGTCTAAGGAAATTCCGAAGAGTGCCTTGGTTTGGGCGTTGACTCACGTCGTGCAACCAGGCGATTGCATAACTCTTCTCGTAGTTGTCCCCTCTCAAAGCTCTGGTAGAAAACTGTGGGGTTTACCAAGATTTGCTGGGGATTGTGCCAATGGTCACAAAAAGTCACATTTAGGAGCAAGCCCCGACCAAACATACGATATTACGGATTCATGCTCCCAGATGATCCTTCAACTTCATGATGTTTATGATCCTGATAAGATCAATGTTGAGATAAAGATTATATCCGGGTCTCCTATTGGGGGAGTGGCTTTAGAAGCCAAGAGAGCTCATGCCAGTTGGATTGTGTTAGACAAGCAGCTTAAAAACGAGGAGAAGCGTTGCATGGAAGAGCTGCAATGCAACATTGTGGTCATGAAGCGTTCCCAGCCAAAAGTTCTTCGCTTGAGTTTGGTCGGTTCACCTAAAAACGAACCTGAAGTGGTTTCTCCTTTATGTTCTGATCCAGAAGAAGGGACTGAAAATAATCATGGAAAAAAGCATTCTTTCTGTACTATTCGCGGTCCTTTAGTAACTCCAAATAGCAGCCCTGAGCTAGGTACTCCATTTACTGCCACTGAAGCCGGGACTTCATCAGTGTCAAGCTCGGGTCAGGGAACATCGCCTTTTTTCATTTCCGAAATGATTGGAGATCCGAAAAAAGAGGAATCCCTAGTAATCAAGGAGAACAAAGAGCTTGATTGTGCAAGTTCAGACTCAGACTGTGAGAATGTCTCAATAATATCATCGACAAGTATGAGATTCCAACCTTGGATGATAGAATTTATTAGATCTCATTATAGACCCTTGCAACACGAGAACGGGATGTCACATAGATGTGAAGATAAGTTTCAAGAATCAACTAGCAAAATTTTGGAACGAATGCAAAACAACAGAAATAATGCGGAATTTAGTGGTAATGTCAGAGAAGCTGTCTCCTTGTCCAGAACTATGCCTCTCGGGCCCCCGCCGTTGTGTTCAATATGCCAACATAAAGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCGGCTATGCTGAGCTGGAGGTTGCGACTGGTGGATTTTCTCAGGCCAATTTCTTGGCGGAAGGAGGGTTTGGATCGGTTCACAGAGGAGTTCTACCTGATGGTCAAGCAGTTGCTGTCAAGCAACATAAACTTGCCAGTTCTCAAGGAGACCTCGAGTTTTGTTCGGAAGTGGAAGTCCTCAGCTGTGCTCAGCATCGGAATGTCGTTATGCTGATTGGCTACTGCATTGAGGACAAAAGAAGGTTACTTGTGTATGAATATATCTGCAATGGATCATTGGATTCTCATCTATATGGACCGCAACGAGTACCGTTAGAATGGTCTGCACGACAAAAAATTGCTCTAGGAGCTGCTCGAGCACTGCGATATCTTCACGAAGAATGTAGAGTAGGCTGCATTGTTCACCGTGACATGCGACCAAATAACATTCTTATCACTCATGATTTTGAACCTCTGGTTGGAGACTTTGGCATTGCAAGATGGCAGCCAGACGGAGACAAGGGCATGGAAACTAGAGTAGTAATCGGAACTTTTGGGTATTTGGCTCCCGAGTACGCACAAAGTGGCCAAATCACAGAAAAGGCGGATGTTTACTCCTTCGGTGTCGTGTTGGTGGAGCTAATCACCGGAAGAAAAGCAGTGGATCTCAACCGGCCAAATGGCCAACAGTGCCTCACTGAGTGGTCACGGCCATTGTTGGAAGATTTAGCCATTCATGATCTGATTGATCTAAGATTGGGGAGTGCATATTCAGAGCGTGAAGTTTACTGCATGCTTCATGCGGCATTGTTGTGCATACAGAGGGACCCTAATGCTCGGCCCAGCATGTCTCAGGTGAGAAAAATATCGGTACATTTCACGGAATAA 2001 45.43 MNREQKQEKGSGAAGKVVVAVRESKEIPKSALVWALTHVVQPGDCITLLVVVPSQSSGRKLWGLPRFAGDCANGHKKSHLGASPDQTYDITDSCSQMILQLHDVYDPDKINVEIKIISGSPIGGVALEAKRAHASWIVLDKQLKNEEKRCMEELQCNIVVMKRSQPKVLRLSLVGSPKNEPEVVSPLCSDPEEGTENNHGKKHSFCTIRGPLVTPNSSPELGTPFTATEAGTSSVSSSGQGTSPFFISEMIGDPKKEESLVIKENKELDCASSDSDCENVSIISSTSMRFQPWMIEFIRSHYRPLQHENGMSHRCEDKFQESTSKILERMQNNRNNAEFSGNVREAVSLSRTMPLGPPPLCSICQHKAPVFGKPPRWFGYAELEVATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGYCIEDKRRLLVYEYICNGSLDSHLYGPQRVPLEWSARQKIALGAARALRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGIARWQPDGDKGMETRVVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNRPNGQQCLTEWSRPLLEDLAIHDLIDLRLGSAYSEREVYCMLHAALLCIQRDPNARPSMSQVRKISVHFTE 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12142001 12144962 + Bma004524.1 Bma10g00758 89821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00758 666 Pfam Protein kinase domain 394 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00758 666 Gene3D Transferase(Phosphotransferase) domain 1 466 665 - -
Bma10g00758 666 SUPERFAMILY Protein kinase-like (PK-like) 374 659 IPR011009 -
Bma10g00758 666 PANTHER OS01G0253100 PROTEIN 13 660 IPR045271 GO:0004714|GO:0006468
Bma10g00758 666 MobiDBLite consensus disorder prediction 181 242 - -
Bma10g00758 666 ProSitePatterns Tyrosine protein kinases specific active-site signature. 511 523 IPR008266 GO:0004672|GO:0006468
Bma10g00758 666 Gene3D Phosphorylase Kinase; domain 1 362 465 - -
Bma10g00758 666 CDD USP_Like 16 139 - -
Bma10g00758 666 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 13 660 - -
Bma10g00758 666 ProSiteProfiles Protein kinase domain profile. 390 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00758 666 CDD STKc_IRAK 396 657 - -
Bma10g00758 666 MobiDBLite consensus disorder prediction 210 242 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00880 Bma-Chr1:8255810 Bma10g00758 Bma-Chr10:12142001 1.84E-91 dispersed
Bma04g00192 Bma-Chr4:1714569 Bma10g00758 Bma-Chr10:12142001 7.72E-163 dispersed
Bma10g00758 Bma-Chr10:12142001 Bma13g01236 Bma-Chr13:45626188 0 dispersed
Bma10g00758 Bma-Chr10:12142001 Bma10g00748 Bma-Chr10:11821441 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66745 PF00069 Pkinase 1.50E-40 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00758 - - zju:107404004 1013.83