Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00806 TTCTGCTTGCAGTTGGCGAAAAGTTCATCCAATGGAGCTGCAAAACTGTACGCAACTATTGCTCTTGAAAACACTGTAGTTGGGAGGACCAGAATAGTAACACAAGAACATTCAAACCCAAGATGGTTCGAGACTTTCCAGATATACTGCGCGCATTTGGCTTCACACATTGTCTTCAGAGTCAAGAACAACAACGCCGTTGGGGCAACTACAATCGGAAAGGTATATTTTCTTGCCGAAAAACTCTTACATGGGGAAGAAGTGGACATGTGGTTTGAACTCTTGAACAAAGACTGCAAACCCATATTTAGAAACTCTAAGATCCATGTCAAAATACAATATTTCGAAGCTGGACGGGACTGGAATTGGTCTCGTGGAATATTCAGACCTAGATTTCCAGGGGTACCTTACACATTCCACCCGCAAAGAAGCGGCTGTAAAGTGTCGTTGTATCAAGACGCTCACGTCCCGGATAAATTCGTTCCGAAGATATCTTTAGCCGGCGGGAAATTTTATGAACCTCGGAGATGCTGGGAAGATGTATTTGATGCGATAAGTAATGCACAACATTTGATCTACATTGCTGGCTGGTCTGTGTACACTGAAATTACGTTGGTGAGAGACCCCCGGAGGCCTAAGCCGGGAGGAGATATCACCCTTGGAGAGCTGTTGAAGAAGAAGGCTAGTGAGGGTGTACGAGTTCTTATGCTCGTTTGGGACGATAGAACTTCGGCCGGTTTGCTTAAAAAGGATGGATTAATGGCTACTCATGATGAAGAAACTCTGAATTATTTTCAGAATACGGATGTGCATTGTGTATTATGCCCTCGAAATCCCGACGACGGGGGAAGCTTGGTTCAGAATTTGAAAATCGCCACGATGTTCACTCATCATCAGAAGATTGTCGTGGCAGATAGCTCGATGCCGGTAGGAGGGTCGGAAAAGAGGAGAATCGTGAGTTTCGTCGGGGGTCTCGATCTCGCCGATGGAAGATACGATACTCCATTCCATTCCCTTTTCAGGACATTGGACACGGCCCATTTCGACGATTTCTATCAGAAAAACTTCGTCGGTTCTTCGATAGCAAGAGGCGGTCCAAGGGAGCCTTGGCATGACATCCATTGTCTCCTGGAAGGCCCTGTCGCTTGGGACGTGCTGTTTAGCTTCGAGCAGAGGTGGAGAAAGCAGAGTGGAAAAGACGTGCTCATATCAATTCGAGATCTCGAGGACGTTATAATTCCACCATCTCCGGTTATGTTTCCGTCTGATCACGAGACTTGGAATGTTCAATTGTTTAAATCCCTCGATGGGGGGGCTGCATTTGGCTATCCCGAAGCACCCGAACTCTGTGCTCGAGCCGGACTCGTGAGCGGGAAAGATAACGTTATCGACCGGAGCATTCAAGATGCTTACATTCACGCCGTTCGACGAGCAAAGAACTTCATCTACATTGAGAATCAGTATTTCCTCGGAAGCTCGTTTGCGTGGAGAGCTGACGGGATTAAGCCAGACGATATCGGAGCATTGCATCTGATCCCGAAGGAGATTTCGCTTAAAATTATAAGCAAGATAGAAGCCAAGGAGAGGTTCACTGCTTATATTGTTATTCCAATGTGGCCAGAGGGAATTCCAGAGAGTGCTTCAGTTCAGGCCATTTTGGATTGGCAGAGAAGGACAATGGATATGATGTATAGAGATATCGTTCGAGCTCTGAACGAAAATGGAACTCGCGAGGATCCTCGCAACTACTTGACATTTTTCTGCCTCGGAAATCGCGAGACGAAGAAGGCCGGAGAATTCGTTCCGGCAAAAGAACCTGATCCGAAGTCTGATTATTCAAAAGCTCAGCGGTCTAGGCGCTTCATGATCTATGTCCACTCAAAGATGATGATTGTTGATGATGAATACATAATTGTTGGATCGGCTAACATCAACCAAAGATCGATGGATGGCGGTAAGGACTCGGAAATAGCCATGGGAGCTTTTCAACCATACCACCTATCGACTCCAGATCCTGCACGTGGTCAAATCCACGGCTTTCGCATGGCTTTGTGGTACGAGCATCTTGGCATGCTCGACGACTCTTTCCTCGAGCCAGAGAGTGAAGCCTGCATCGACAAAGTGAATCGAATTGCCCGTAAGAATTGGGATCTGTATTCAGCGACTGATTTGGAACATGATTTGCCGAGTCATTTGCTCCGATATCCTATTCATATTTCGGATGATGGTGGAGTCGAAACAATCGATAGATTGGAGTACTTTCCCGACACGGAAGCAAGGATACTCGGTTCCAAATCAAAGTATCTCCCTTCCATCCTTACAACTTAG 2328 46.43 FCLQLAKSSSNGAAKLYATIALENTVVGRTRIVTQEHSNPRWFETFQIYCAHLASHIVFRVKNNNAVGATTIGKVYFLAEKLLHGEEVDMWFELLNKDCKPIFRNSKIHVKIQYFEAGRDWNWSRGIFRPRFPGVPYTFHPQRSGCKVSLYQDAHVPDKFVPKISLAGGKFYEPRRCWEDVFDAISNAQHLIYIAGWSVYTEITLVRDPRRPKPGGDITLGELLKKKASEGVRVLMLVWDDRTSAGLLKKDGLMATHDEETLNYFQNTDVHCVLCPRNPDDGGSLVQNLKIATMFTHHQKIVVADSSMPVGGSEKRRIVSFVGGLDLADGRYDTPFHSLFRTLDTAHFDDFYQKNFVGSSIARGGPREPWHDIHCLLEGPVAWDVLFSFEQRWRKQSGKDVLISIRDLEDVIIPPSPVMFPSDHETWNVQLFKSLDGGAAFGYPEAPELCARAGLVSGKDNVIDRSIQDAYIHAVRRAKNFIYIENQYFLGSSFAWRADGIKPDDIGALHLIPKEISLKIISKIEAKERFTAYIVIPMWPEGIPESASVQAILDWQRRTMDMMYRDIVRALNENGTREDPRNYLTFFCLGNRETKKAGEFVPAKEPDPKSDYSKAQRSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGKDSEIAMGAFQPYHLSTPDPARGQIHGFRMALWYEHLGMLDDSFLEPESEACIDKVNRIARKNWDLYSATDLEHDLPSHLLRYPIHISDDGGVETIDRLEYFPDTEARILGSKSKYLPSILTT 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13224797 13227214 + Bma004597.1 Bma10g00806 89869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00806 775 Gene3D C2 domain 2 121 IPR035892 -
Bma10g00806 775 ProSiteProfiles C2 domain profile. 1 92 IPR000008 -
Bma10g00806 775 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 293 331 IPR001736 GO:0003824
Bma10g00806 775 Pfam Phospholipase D C terminal 693 765 IPR024632 -
Bma10g00806 775 Pfam Phospholipase D Active site motif 622 648 IPR001736 GO:0003824
Bma10g00806 775 Pfam Phospholipase D Active site motif 293 331 IPR001736 GO:0003824
Bma10g00806 775 Gene3D Endonuclease Chain A 167 409 - -
Bma10g00806 775 SUPERFAMILY Phospholipase D/nuclease 119 411 - -
Bma10g00806 775 Pfam C2 domain 5 94 IPR000008 -
Bma10g00806 775 SUPERFAMILY Phospholipase D/nuclease 455 704 - -
Bma10g00806 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 116 IPR035892 -
Bma10g00806 775 Gene3D Endonuclease Chain A 453 662 - -
Bma10g00806 775 PANTHER PHOSPHOLIPASE D 10 775 - -
Bma10g00806 775 SMART pld_4 621 648 IPR001736 GO:0003824
Bma10g00806 775 SMART pld_4 293 331 IPR001736 GO:0003824
Bma10g00806 775 PANTHER PHOSPHOLIPASE D 10 775 IPR015679 -
Bma10g00806 775 PIRSF PLD_plant 2 775 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bma10g00806 775 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 621 648 IPR001736 GO:0003824
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g00903 Bma10g00806 CCT
Bma09g00903 Bma10g00806 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00594 Bma-Chr7:8662859 Bma10g00806 Bma-Chr10:13224797 0 dispersed
Bma10g00806 Bma-Chr10:13224797 Bma12g00109 Bma-Chr12:1720156 0 dispersed
Bma15g00335 Bma-Chr15:3307069 Bma10g00806 Bma-Chr10:13224797 0 transposed
Bma10g00806 Bma-Chr10:13224797 Bma15g00411 Bma-Chr15:4461030 3.61E-14 wgd
Bma10g00806 Bma-Chr10:13224797 Bma09g00903 Bma-Chr9:48415787 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00806 K01115 - twl:120010960 1237.63