Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00816 ATGTCTATGGCTTCTCGCCTCATGTTTTGCTGTGGGACTCATTCGGATCGGAAAGACCGAGGGAAGAAGCAGCAATCGTGGAGGGTCTTTTCGTTGAAGGAACTACTCTCTGCGACAAATAATTTTAATTACGATAACAAGCTCGGAGAAGGCGGATTTGGTAGCGTCTACTGGGGTCAGCTTTGGGATGGATCTCAAATAGCAGTGAAGAGATTGAAGGTGTGGAGCAACAAAGCGGAGATTGAGTTTTCTGTCGAAGTTGAGATATTGGCTCGAGTTCGACACAAGAATCTGCTGACCTTACGAGGTTATTGCGCTGAGGGTCAAGAGCGGTTGATTATCTACGACTACATGCCAAACTTGAGCTTAGTCTCCCACCTCCACGGGCAGAATTCGGCCGAGTCTGTTCTCGATTGGAGCCGTCGGATGAAAATAGCAATCGGGTCGGCTGAGGGAATTGCCTATCTTCACAATAAAGCTACTCCTCATATCATTCACCGAGACATCAAAGCTAGTAACGTCCTTCTCGATCCAAATTTCGAGGCCCAAGTCGCTGATTTTGGATTTGCTAAACTCATCCCAGACGGTGCGACACACGTGACGACTAGAGTAAAGGGTACTCTCGGCTATCTTGCCCCTGAATATGCAATGTTGGGGAAAGCCTCTGAGAGTTGTGATGTTTACAGTTTTGGCATTCTCTTGCTTGAGCTGGCCACAGGAAGAAAACCCCTCGAGAAAGTGAATTCGACGATGAAACGGTCCATTGCCGAGTGGGCACTGCCCTTGGCTTCTGAGCAAAAGTTTGATGAACTTGCCGACCCGAAGCTGAATGGAGAGTATGTAGCGGATGAGCTAAAAAGAGTTATCCTTGTAGCTCTCATATGTGCTCATAATCAGCCTGAGAGAAGACCTACAATGGTGGATGTGGTGGAGCTGTTGAAGGGAGAATCAAAAGAGTTCTCCAAATTGGAAAGTGATCAACTTTTTAAGAATCCTCAACCAGCAGCCAATAACGAGGCAGCTGCTGCTGAAGACGGTTCAGACCTGGTCTCGGAGGAGAAGGAATGA 1068 47.57 MSMASRLMFCCGTHSDRKDRGKKQQSWRVFSLKELLSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEIEFSVEVEILARVRHKNLLTLRGYCAEGQERLIIYDYMPNLSLVSHLHGQNSAESVLDWSRRMKIAIGSAEGIAYLHNKATPHIIHRDIKASNVLLDPNFEAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGRKPLEKVNSTMKRSIAEWALPLASEQKFDELADPKLNGEYVADELKRVILVALICAHNQPERRPTMVDVVELLKGESKEFSKLESDQLFKNPQPAANNEAAAAEDGSDLVSEEKE 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13953504 13955638 + Bma004611.1 Bma10g00816 89879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00816 355 PIRSF ILK 12 331 - -
Bma10g00816 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Bma10g00816 355 Pfam Protein kinase domain 43 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00816 355 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Bma10g00816 355 MobiDBLite consensus disorder prediction 324 355 - -
Bma10g00816 355 Gene3D Transferase(Phosphotransferase) domain 1 118 329 - -
Bma10g00816 355 Gene3D Phosphorylase Kinase; domain 1 9 117 - -
Bma10g00816 355 PANTHER BNAA05G14800D PROTEIN 3 355 - -
Bma10g00816 355 SUPERFAMILY Protein kinase-like (PK-like) 24 313 IPR011009 -
Bma10g00816 355 CDD STKc_IRAK 48 315 - -
Bma10g00816 355 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00816 355 ProSiteProfiles Protein kinase domain profile. 42 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00816 355 PANTHER OS01G0750732 PROTEIN 3 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00816 Bma-Chr10:13953504 Bma15g00105 Bma-Chr15:1126644 6.22E-99 dispersed
Bma10g00816 Bma-Chr10:13953504 Bma14g01795 Bma-Chr14:38539221 1.38E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66747 PF00069 Pkinase 5.00E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00816 - - rcu:8282354 584.334