Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00830 ATAGTGTCGATGACGCTGCTCTCGGACTTTGCTACCGAGATAGTGATTCCAGTTTGCGCTGTAGTGGGAATAGCTTTCTCGTTGGTCCAATGGCTGCTCGTTTCGCGAGTGAAGTTGACGCCCGAGCGGCGAACTTCTTCCGTAAACAGCAACAAGAATGGCCATGGCGACTACCTCATTGAAGAAGAAGAAGAAGGGCTTAATGACCATAATGTTGTTCTTAAGTGCGCTGAAATACAAAATGCAATTTCTGAAGGTGCTACATCCTTCCTCTTTACTGAATATCAGTATGTTGGGGTCTTCATGGTTGCATTTGCAATTTTGATCTTTCTATTCCTGGGGTCTGTGGAGGGCTTCAGCACAAAGAGTCAGTCATGTACTTACAGTCCGGAAAAAATGTGCAAGCCAGCTCTTGCCACGGCCATCTTCAGTACACTGTCTTTCTTGTTAGGTGCTATCACCTCAGTCTTATCAGGTTATCTTGGCATGAAAATTGCTACTTATGCAAATGCAAGGACGACATTGGAAGCAAGAAAAGGTGTTGGAAAGGCCTTTATTGTTGCATTTAGGTCTGGTGCCGTAATGGGTTTTCTCCTAGCTGCAAACGGTCTTTTGGTCCTGTATATTACCATCAATCTCTTTAAGTTGTATTATGGTGATGACTGGGAAGGCCTCTTTGAGGCTATTACTGGTTATGGTCTTGGTGGATCTTCTATGGCTCTGTTTGGGAGAGTCGGTGGTGGTATCTACACGAAGGCTGCAGATGTTGGTGCTGATCTGGTCGGAAAGGTTGAGAGAAATATTCCTGAAGATGACCCGAGAAACCCAGCTGTTATTGCCGATAACGTTGGTGATAATGTTGGTGATATTGCCGGAATGGGATCTGATCTTTTCGGCTCATATGCTGAGTCATCTTGTGCTGCTCTTGTTGTTGCTTCCATATCTTCTTTTGGAATCGACCACGACTTTACTGCAATGTGCTATCCTCTTCTCATAAGCTCAATGGGTATCCTTGTTTGTTTGATCACAACGCTCTTTGCCACCGACTTTTTTGAGATCAAGTCTGTTAAAGAAATCGAGCCAGCACTAAAGAAGCAGCTTATCATTTCCACTGTTATTATGACTTTGGGAATTGCTGTCATTAGTTTGATTGCTTTACCATCTTCCTTCACAATTTTCAATTTTGGTACCCAGAAAGTTGTCAAGAACTGGCAACTTTTCTTGTGTGTGGGCGTCGGTCTTTGGGCTGGACTTATTATTGGTTTTGTAACCGAGTATTATACTAGCAATGCTTACAGCCCCGTGCAAGATGTTGCAGATTCTTGCAGAACCGGGGCAGCCACTAACGTAATCTTTGGACTTGCTCTGGGATACAAGTCCGTTATAATTCCAATTTTTGCCATTGCTGTCAGTATTTTTGTTAGTTTTAGTTTTGCTGCTATGTATGGCATTGCTGTGGCGGCTCTTGGAATGCTGAGCACTATTGCTACTGGACTGGCCATTGATGCTTATGGACCTATCAGTGACAATGCTGGAGGCATTGCTGAAATGGCAGGCATGAGTCACCGAATTCGCGAGAGAACTGATGCTCTTGATGCTGCTGGAAACACCACTGCTGCTATTGGAAAGTGCTACATTTTCCAAACACAGCCTAAGTTTTGTGAAAGGGCCGTTGTTACCTTTTTCCAGGGCTTTGCCATTGGATCAGCGGCACTAGTGTCCTTGGCCTTATTTGGTGCCTTTGTCAGCAGAGCTTCAATCTCAACCGTTGATGTCTTGACCCCGAAAGTATTCATCGGATTGATTGTCGGAGCCATGCTTCCCTACTGGTTCTCTGCAATGACCATGAAAAGTGTTGGAAGTGCCGCTTTGAAAATGGTGGAGGAAGTTCGCCGACAGTTCAACACTATACCAGGTCTGATGGAAGGAATTGCCAAACCAGATTACGCCACTTGTGTTAAGATCTCCACCGATGCCTCCATTAAGGAGATGATTCCTCCGGGTGCCCTTGTCATGCTCACACCCCTCATTGTCGGGACCTTCTTTGGCGTTGAAACCCTATCTGGCGTCCTAGCCGGCTCTCTAGTTTCAGGCGTCCAGGTAGCAATATCAGCTTCTAACACTGGTGGTGCATGGGACAATGCCAAGAAATACATTGAGGCCGGTGCTTCGGAGCATGCAAGGACTCTCGGGCCTAAAGGATCGGAACCACACAAGGCGGCTGTGATCGGTGACACCATCGGAGATCCTCTGAAGGACACTTCCGGCCCCTCTCTCAACATCCTAATCAAGCTCATGGCCGTGGAATCTCTAGTATTTGCACCATTTTTCGCCACTCATGGCGGCCTGCTTTTTAAGATGTTTTGA 2367 46.01 IVSMTLLSDFATEIVIPVCAVVGIAFSLVQWLLVSRVKLTPERRTSSVNSNKNGHGDYLIEEEEEGLNDHNVVLKCAEIQNAISEGATSFLFTEYQYVGVFMVAFAILIFLFLGSVEGFSTKSQSCTYSPEKMCKPALATAIFSTLSFLLGAITSVLSGYLGMKIATYANARTTLEARKGVGKAFIVAFRSGAVMGFLLAANGLLVLYITINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGIDHDFTAMCYPLLISSMGILVCLITTLFATDFFEIKSVKEIEPALKKQLIISTVIMTLGIAVISLIALPSSFTIFNFGTQKVVKNWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKCYIFQTQPKFCERAVVTFFQGFAIGSAALVSLALFGAFVSRASISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGIAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKMF 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14646783 14651479 + Bma004626.1 Bma10g00830 89893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00830 788 Pfam Inorganic H+ pyrophosphatase 563 773 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bma10g00830 788 Pfam Inorganic H+ pyrophosphatase 66 546 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bma10g00830 788 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 4 788 - -
Bma10g00830 788 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 12 546 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bma10g00830 788 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 10 778 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bma10g00830 788 PIRSF H+-PPtase 10 550 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bma10g00830 788 PIRSF H+-PPtase 557 786 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bma10g00830 788 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 788 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00600 Bma-Chr7:8725833 Bma10g00830 Bma-Chr10:14646783 4.76E-34 dispersed
Bma10g00689 Bma-Chr10:10438711 Bma10g00830 Bma-Chr10:14646783 5.04E-145 dispersed
Bma10g00830 Bma-Chr10:14646783 Bma13g00605 Bma-Chr13:14262975 0 dispersed
Bma10g00830 Bma-Chr10:14646783 Bma11g00845 Bma-Chr11:28232103 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00830 K23025 - vvi:100256710 1398.65