Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00841 ATGGAGAAGAAGAAGTATCCCATTGGAGCAGACCATTATGCGCTGTATGAGGAAGTGGGGCATGGTGTTAGTGCTTCAGTGCGACGTGCTCTTTGCAGACCTTTTAACGAGATTGTCGCCATCAAGATTCTCGATTTTGAACGGGACAATATCGATCTGAACAATATATCTCGAGAAGCACAAACAATGGTCTTGGTCGACCACCCCAATGTCCTTAACTCACACTGCTCGTTCGTTAGTGACCACGAACTATGGGTGGTCATGCCATTTATGGCCGGTGGCTCGTGTTTCCACATTTTGAAATCTGCTTATCCTGATGGTTTTGAAGAAGTAGTCATTGCAACCATACTGAGGGAGGTACTGAAGGGTCTAGAGTATCTTCATCAGCATGGACACATACATCGAGATGTCAAAGCTGGAAATATTCTGATCGATGCAAGAGGTCAAATAAAGCTGGGGGATTTTGGTGTTGCTGCTTGCCTTTTTGATTCAGGGGACAGGCAGCGCGTGAGAAATACCTTTGTCGGAACACCTTGCTGGATGGCACCCGAAGTTATGGAGCAAATACGTGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGGCATTACTGCACTAGAGCTTGCTCATGGCCATGCTCCTTTCTCAAAGTATCCTCCAATGAAGGTGCTGCTGATGACCCTGCAAAATGCGCCTCCTGGCCTTGATTATGAGAGAGATCGGAAATTTTCAAAGTCTTTTAAGCAGATGATTGCTAGTTGTTTGGTGAAAGATCCTTCGAAACGACCTTCTGCAAAGAAGTTATTGAAGCATTCTTTCTTCAAGCAAGCTCGTTCGAATGATTATATTGCACGTGTCCTTTTGGAAGGCCTGCCTGCTCTAGGTGATCGTATTGAGGCCTTAAAGAGAAAGGAAGAAGATATGCTCGCACAAAAGAAGATGCCTGATGTGCAGAAAGAAGAAATATCCCAGAACGAATACAAAAGAGGAATCAGCGGGTGGAACTTCAATCTTGATGATGTGAAAGCTCAGGCATCGTTGATACAAGATGTTAATGACCCCATAATCGAAAATAATCCAGAAGGGAGCTCAGATTCTTTGTGTGCACTTGATGTCCAAGAAAATCAAACCCATAATCTAAACTCTTCTCTGGCGACCGATGTGGTTGAGGATGATATGATGCAGAACCAATCTGTTCGGCTTCCACTAGTTGACCCGAAATCTAATGCTTTGGAAGTCGGAAATGACAAATCAGATTTAGATCATACCATTGGTAGATCATGCCATGAGCACAACCATGATCATCTAACCGACAACAATTTGATTGAGCCGCGTGGTGTGGAGAAAATTGAAAAGGGTTTTGAAAGGCCACCTAATGGTCTTCTTCATAGAAGAGCATTTTCAGCTTCACCTTATCCGACCATCCTAGAAGTTGCTCTGCCGCGTTATAAAGGAGACAGTGATGATTTGCAAAAGCAGCTTCCCAACATTCCAAATTATGACATTGCAACCGATTACCAGGCTTTGGATGATGTTGAAGTTTCTTCTAAGGCTAAGTCACCAGCAAACGGCGAAAGACTCGAGGAGAAGGAAAAGGTGCCGGTAGTTCAACAAAAAGGCCGTTTCAAAGTGACGTCCGAGAATGTTGACTTACAAAGGCCTCTGCCTAGTCCTGTGCTACAAAAGAGTCACAGCATGCAGGTGATTACTTCACATTCTCCTCCAATTCCTCTTCCATCAGTTCTACCGACACCTCAACCATCGCCTCTACATTCGCCTTCTAAAGTTGCATCATCTCATTCCGGCTCTGCTCTCTTTTCCGAATTGCTTTCTGCTTTGCAGTCAAACATTATTCAAAGGGAAAGTGTTTTGACTTTAATGAAGCATTGTACTGCTGCTGACTCAGCAGTGAACCGTGTTGTTGACGGAGGAGGTAAAGCAACCTTTCCATCACTATTGGAAAAATCTATGCTCGAATCGGCCCATGACAGAGAAAAAGAGTTGCTTTATGAAATCACCGAGCTGCAGAGGAGACTCATAATTGCCCAAGATGAACTTCAAAAACTTAAAACATAA 2076 43.88 MEKKKYPIGADHYALYEEVGHGVSASVRRALCRPFNEIVAIKILDFERDNIDLNNISREAQTMVLVDHPNVLNSHCSFVSDHELWVVMPFMAGGSCFHILKSAYPDGFEEVVIATILREVLKGLEYLHQHGHIHRDVKAGNILIDARGQIKLGDFGVAACLFDSGDRQRVRNTFVGTPCWMAPEVMEQIRGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNDYIARVLLEGLPALGDRIEALKRKEEDMLAQKKMPDVQKEEISQNEYKRGISGWNFNLDDVKAQASLIQDVNDPIIENNPEGSSDSLCALDVQENQTHNLNSSLATDVVEDDMMQNQSVRLPLVDPKSNALEVGNDKSDLDHTIGRSCHEHNHDHLTDNNLIEPRGVEKIEKGFERPPNGLLHRRAFSASPYPTILEVALPRYKGDSDDLQKQLPNIPNYDIATDYQALDDVEVSSKAKSPANGERLEEKEKVPVVQQKGRFKVTSENVDLQRPLPSPVLQKSHSMQVITSHSPPIPLPSVLPTPQPSPLHSPSKVASSHSGSALFSELLSALQSNIIQRESVLTLMKHCTAADSAVNRVVDGGGKATFPSLLEKSMLESAHDREKELLYEITELQRRLIIAQDELQKLKT 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15014080 15019337 + Bma004636.1 Bma10g00841 89904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00841 691 Coils Coil 658 691 - -
Bma10g00841 691 SUPERFAMILY Protein kinase-like (PK-like) 11 590 IPR011009 -
Bma10g00841 691 Gene3D Transferase(Phosphotransferase) domain 1 94 328 - -
Bma10g00841 691 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Bma10g00841 691 MobiDBLite consensus disorder prediction 514 539 - -
Bma10g00841 691 MobiDBLite consensus disorder prediction 576 590 - -
Bma10g00841 691 Pfam Protein kinase domain 14 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00841 691 MobiDBLite consensus disorder prediction 568 596 - -
Bma10g00841 691 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00841 691 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 691 - -
Bma10g00841 691 CDD STKc_OSR1_SPAK 11 274 - -
Bma10g00841 691 MobiDBLite consensus disorder prediction 522 537 - -
Bma10g00841 691 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Bma10g00841 691 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00841 691 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 691 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00975 Bma-Chr1:9607098 Bma10g00841 Bma-Chr10:15014080 0 dispersed
Bma05g00683 Bma-Chr5:39699566 Bma10g00841 Bma-Chr10:15014080 8.37E-172 dispersed
Bma10g00841 Bma-Chr10:15014080 Bma14g00255 Bma-Chr14:3020751 5.67E-59 dispersed
Bma10g00841 Bma-Chr10:15014080 Bma12g00255 Bma-Chr12:3305310 6.06E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66748 PF00069 Pkinase 5.30E-60 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00841 K08835 - jre:108985864 928.702