Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00843 ATGATCATCAACGTGAAGAAGTCAACGATGGTGAGCCCGTCCGGAGAAACGCCCCAGAAAAGCCTGTGGAACTCGAACGTAGACCTTGTGGTGCCAAGCATGCACACCCCAAGCGTCTATTTCTACAGGCCTACAGGCGCCTCCAATTTCTTCGATGCTCAGGTCCTGAAGGAGGCCCTTAGCAAGGCCTTGGTCCCCTTCTACCCCATGGCTGGCCGGTTGAAGAGGGACGAAGACGGTCGAATCGAGATCGACTGTAGAGGACAAGGCGTGCTCTTCGTGGAGGCTGATACCAGTTCAGTTGTGGATGATTTTGGTGACTTTGCTCCCACTTTGAAGCTCCGGCAGCTCATTCCAACCGTTGATTATTCGGGTGGAATCGAGTCTTATCCCTTGCTGGTCTTACAGGTTACCTATTTTAAATGCGGGGGAGTTTCACTCGGTGTTGGTATGCAACATCATGTTGCCGATGGATTTTCCGGCCTCCATTTTGTGAACACATGGTCCGATATGGCTCGTGGTCTGGACCTTTCGGTTCCGCCGTTTATTGACCGAAGTTTACTCGAGGCGCGGGACCCTCCAAAACCGGCATTCCACCACATCGAATACCAGCCTCCTCCTTCCATGAAGACTCCCTTGCTTCCCGGCGAACCAGGCTCCGATGCCACTTCCGTTTCAATTTTGAAAATTTCCCGTGATCAACTCGACAAACTGAAGGGCAAATCGAGAGAAAACGGTAACACAATCAACTATAGCTCGTACGAGATGTTATCGGGCCATGTGTGGAGATGTGTTTGCATTGCCCGTGGACTTCCTGATGATCAGGAGTCGAAGCTGTACATCGCGACAGATGGACGGTTCCGATTGCGTCCTCATCTTCCTCCCGGTTACTTTGGCAATGTGATCTTCACTGCCACGCCTCTAGCATTGGCTGGTGATCTTCAATCAAAACCCACGTGGTATGCTGCAAGTAGGATCCATGATGCCTTGGTGAAGATGGACAATGATTATTTAAGATCAGCCCTTGATTATCTAGAGCTACAACCTGATTTGTCGGCTCTCGTGCGCGGTGCCCACACATTTAGGTGTCCGAATCTCGGGATCACTAGTTGGGTCAGGCTGCCGATCCACGATGCTGATTTCGGGTGGGGCCGGCCGATTTTCATGGGCCCCGGCGGAATTGCATACGAAGGTTTGGCGTTTATAATACCAAGTCCCAGCGACGACGGAAGCTTATCGGTGGCGATCGCCCTGCAATCTCGACACATGAAAGTTTTCGAGAAGTTGTTGTATGAAATTTGA 1302 51.31 MIINVKKSTMVSPSGETPQKSLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDAQVLKEALSKALVPFYPMAGRLKRDEDGRIEIDCRGQGVLFVEADTSSVVDDFGDFAPTLKLRQLIPTVDYSGGIESYPLLVLQVTYFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMARGLDLSVPPFIDRSLLEARDPPKPAFHHIEYQPPPSMKTPLLPGEPGSDATSVSILKISRDQLDKLKGKSRENGNTINYSSYEMLSGHVWRCVCIARGLPDDQESKLYIATDGRFRLRPHLPPGYFGNVIFTATPLALAGDLQSKPTWYAASRIHDALVKMDNDYLRSALDYLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLAFIIPSPSDDGSLSVAIALQSRHMKVFEKLLYEI 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15026357 15028156 - Bma004638.1 Bma10g00843 89906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00843 433 Pfam Transferase family 3 429 - -
Bma10g00843 433 Gene3D - 217 433 IPR023213 -
Bma10g00843 433 Gene3D - 1 205 IPR023213 -
Bma10g00843 433 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 432 - -
Bma10g00843 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00843 Bma-Chr10:15026357 Bma14g01152 Bma-Chr14:16400252 1.74E-55 dispersed
Bma13g00969 Bma-Chr13:41354541 Bma10g00843 Bma-Chr10:15026357 1.57E-23 dispersed
Bma15g00283 Bma-Chr15:2784539 Bma10g00843 Bma-Chr10:15026357 3.07E-33 dispersed
Bma01g00385 Bma-Chr1:3166155 Bma10g00843 Bma-Chr10:15026357 6.08E-103 transposed
Bma01g00751 Bma-Chr1:6915264 Bma10g00843 Bma-Chr10:15026357 2.30E-48 transposed
Bma03g00238 Bma-Chr3:1802484 Bma10g00843 Bma-Chr10:15026357 5.32E-52 transposed
Bma04g01673 Bma-Chr4:52527819 Bma10g00843 Bma-Chr10:15026357 1.24E-81 transposed
Bma08g00267 Bma-Chr8:3592360 Bma10g00843 Bma-Chr10:15026357 9.37E-85 transposed
Bma08g00888 Bma-Chr8:47527377 Bma10g00843 Bma-Chr10:15026357 1.14E-82 transposed
Bma09g00149 Bma-Chr9:4994472 Bma10g00843 Bma-Chr10:15026357 2.69E-44 transposed
Bma11g00497 Bma-Chr11:6206341 Bma10g00843 Bma-Chr10:15026357 2.67E-50 transposed
Bma11g01005 Bma-Chr11:45580603 Bma10g00843 Bma-Chr10:15026357 7.19E-35 transposed
Bma13g00135 Bma-Chr13:1413956 Bma10g00843 Bma-Chr10:15026357 3.77E-25 transposed
Bma15g00882 Bma-Chr15:29753726 Bma10g00843 Bma-Chr10:15026357 2.30E-12 transposed
Bma10g00843 Bma-Chr10:15026357 Bma13g00656 Bma-Chr13:16170772 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00843 K13065 - jre:109008231 756.518