Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00854 ATGTACGAGAATTACAATGCATTGAAAACCCAGTTGGTAGATTTTATGAGCAAAAACTCGGACAAGGACCTTAGCCCGTCGAAGAAAAGAAAATCAGAAAGCAGCGACAACAACAACATCAGCAATATTGTCGGAATTGACGCAAATTCCGACGCCAGCTCCAGCGACGAGGAATCATGCAAGAAACCCAGAGAAGAAACAATCAAATCCAGAGTCACAAAAGCTTATTACAAGACTGAACCGTCTAATACGAGCCTGATTGTGAAAGATGGGTATCAATGGAGGAAATATGGGCAAAAAGTGACGAGGGATAATCCTTCCCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCTAGCTGTCCAGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAGTCCATTTTGGTGGCAACTTATGAAGGAGAACACAACCATCCAAACTCTTCTCCAATGGAGGTGAACTCAACCACAACACGACGTTCGGTCCCTCTTTCGAGCTCTCTCGGCTCATCAGGACCGTCCATCAATCTCGACCTCGTGAAATCGAGGACCATTAACGAAGCGAAAGCTTTGGAAGGCAGAACTGCTACGCCTGAAATGCAGCAGTTTCTGGTAGAGCAGATGGCTTCTTCTTTGACAAAAGATCCAAACTTCACAGCAGCATTGGCGGCAGCCATATCTGGAAGAATGTTTTCTGAGATAAGATTCCAATGA 717 44.49 MYENYNALKTQLVDFMSKNSDKDLSPSKKRKSESSDNNNISNIVGIDANSDASSSDEESCKKPREETIKSRVTKAYYKTEPSNTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYEGEHNHPNSSPMEVNSTTTRRSVPLSSSLGSSGPSINLDLVKSRTINEAKALEGRTATPEMQQFLVEQMASSLTKDPNFTAALAAAISGRMFSEIRFQ 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15358132 15359024 - Bma004650.3 Bma10g00854 89917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00854 238 MobiDBLite consensus disorder prediction 142 170 - -
Bma10g00854 238 Pfam WRKY DNA -binding domain 89 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00854 238 ProSiteProfiles WRKY domain profile. 83 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00854 238 MobiDBLite consensus disorder prediction 21 35 - -
Bma10g00854 238 SUPERFAMILY WRKY DNA-binding domain 85 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma10g00854 238 MobiDBLite consensus disorder prediction 36 53 - -
Bma10g00854 238 MobiDBLite consensus disorder prediction 16 66 - -
Bma10g00854 238 Gene3D WRKY domain 72 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma10g00854 238 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 233 IPR044810 GO:0003700
Bma10g00854 238 SMART WRKY_cls 88 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00854 238 MobiDBLite consensus disorder prediction 143 170 - -
Bma10g00854 238 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 1 233 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01264 Bma-Chr1:17133626 Bma10g00854 Bma-Chr10:15358132 2.35E-59 dispersed
Bma10g00854 Bma-Chr10:15358132 Bma10g00563 Bma-Chr10:7043915 4.99E-29 dispersed
Bma10g00846 Bma-Chr10:15059408 Bma10g00854 Bma-Chr10:15358132 5.57E-170 proximal
Bma10g00854 Bma-Chr10:15358132 Bma13g00668 Bma-Chr13:16791555 1.72E-124 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57957 PF03106 WRKY 1.30E-23 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00854 - - rcu:8279744 317.005