Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00862 ATGCCTGTTGATCCTGAAACACACACAACTTTAAGTTACTGCTTCATTGAGTACAATACCACCCAGGAAGCTGAACTTGCTAAGGAGAAAACAAATGGATACAAACTGGACAGAGCACACATATTTGCTGTTAGCATGTTTGATGATTTCGATAAATTTATGAAGGTTGCAGATGAGTGCGCTACACCTGAAAGCATTCCACACTGTCCGGGGGAGAATCTTCGAAGTTGGCTTAGAGATGAGAAAGTTCGCGATCAGTTTGTGATTTGTGCTGGTAATGATACCGAGGTTTTATGGAATGATGCCAGACATATGAAGCCTGATCCTGTGTACAAGCATACTAGGATTGTGATCAACATATTTGACGTTAGAACTGGTAAAGTAATGCGAGATTTCAAGGGAAGTCTGGATGAATTTGCTGTTGGAGGAACAGGAGCTGTTGCAGGAGTGTCTTGGCCAGTTTTTAGATGGGGTGGAAAGAGTGATAAATATTTTGCCAGGATTGCCAAAAACTTAATCTCTGTATATGAAACAGAAACCTTTTCTCTGGTTGACAAGAGGTCATTGAAGGTGGACAATGTTGTGGATTTTAGTTGGTCTCCTACCTACCCAATTCTTGCACTTTTTGTTCCCGAGCTAGGTGGCGGCAACCAACCTGCTAGGTTTTAG 669 42.0 MPVDPETHTTLSYCFIEYNTTQEAELAKEKTNGYKLDRAHIFAVSMFDDFDKFMKVADECATPESIPHCPGENLRSWLRDEKVRDQFVICAGNDTEVLWNDARHMKPDPVYKHTRIVINIFDVRTGKVMRDFKGSLDEFAVGGTGAVAGVSWPVFRWGGKSDKYFARIAKNLISVYETETFSLVDKRSLKVDNVVDFSWSPTYPILALFVPELGGGNQPARF 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15817581 15819092 - Bma004659.1 Bma10g00862 89925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00862 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 114 221 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bma10g00862 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 1 113 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bma10g00862 222 SUPERFAMILY RNA-binding domain, RBD 1 41 IPR035979 GO:0003676
Bma10g00862 222 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2 38 IPR000504 GO:0003723
Bma10g00862 222 Gene3D - 1 57 IPR012677 -
Bma10g00862 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B 114 221 - -
Bma10g00862 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B 1 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00862 Bma-Chr10:15817581 Bma15g00387 Bma-Chr15:4303546 7.50E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00862 K03253 - cit:102614274 194.126