Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00889 ATGGTTGATCAGGTGCAACACCCCACTGTTGTTCAGAAGGTTGCTGGCCAGCTCCACCTTCGCTCTTCACTCACTCCACATTATCAGGGTCATGAGAGTGTTTTCCAAAGATCTGCTATGTACCAAAGGCATGCCACATTTGGAAATTACTCGAACGCTGCAATGGCATCGTCTTGCAGAACGCCAACTGATCTTTTTAGTGTTGCAACAACTGCCTCTCCCATATTTGTCCCGGCACCAGCAGAGAAAAGCACCTTTCTTGTTGATTTCCTTATGGGTGGAGTTTCTGCTGCTGTATCAAAGACAGCTGCTGCCCCAATTGAGCGTGTCAAGCTTTTAATTCAAAATCAGGATGAGATGATCAAATCTGGGAGACTTTCTGAACCATACAAGGGCATTGGTGATTGTTTCAGCCGAACAATGAAAGATGAGGGTGTGGTCGCCCTGTGGAGGGGGAATACTGCTAATGTCATCCGTTACTTCCCCACTCAGGCTTTGAATTTTGCATTCAAGGACTACTTTAAGAGGCTTTTCAACTTTAAGAAAGATAAGGACGGATACTGGAAATGGTTTGCTGGCAACTTGGCTTCAGGTGGTGCAGCTGGGGCTTCATCCCTTCTCTTTGTCTACTCTCTTGACTATGCACGGACCCGATTGGCCAATGATGCCAAAGCTGCAAAGAAAGGAGGTGAAAGACAATTTAATGGGTTGATTGATGTCTACAAGAAGACGATACAATCTGATGGTGTCGCTGGGCTTTACCGGGGATTCAACATTTCATGTGTTGGGATCATCGTTTATCGGGGTCTTTACTTTGGAATGTATGATTCTCTGAAGCCAGTCTTGTTGACTGGAAAGTTGCAGGATAGCTTCTTTGCTAGCTTTGCCCTTGGTTGGCTCATTACCAATGGTGCTGGACTTGCCTCATACCCAATTGACACTGTTCGTAGAAGAATGATGATGACTTCTGGTGAAGCAGTGAAGTACAAGAGCTCATATGATGCTTTTTCTCAGATTCTGAAGAACGAGGGTGCTAAGTCTCTCTTCAAGGGTGCGGGTGCGAATATTCTCCGCGCAGTTGCTGGTGCTGGTGTCCTTGCCGGTTACGACAAGTTGCAGGTACTTGTACTTGGTAAGAAGTATGGATCAGGAGGTGCT 1158 46.2 MVDQVQHPTVVQKVAGQLHLRSSLTPHYQGHESVFQRSAMYQRHATFGNYSNAAMASSCRTPTDLFSVATTASPIFVPAPAEKSTFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFSRTMKDEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTIQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16891152 16892730 + Bma030394 Bma10g00889 89952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00889 386 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 386 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma10g00889 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 289 375 IPR018108 -
Bma10g00889 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 177 IPR018108 -
Bma10g00889 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 281 IPR018108 -
Bma10g00889 386 Pfam Mitochondrial carrier protein 84 181 IPR018108 -
Bma10g00889 386 Pfam Mitochondrial carrier protein 290 376 IPR018108 -
Bma10g00889 386 Pfam Mitochondrial carrier protein 188 284 IPR018108 -
Bma10g00889 386 Gene3D Mitochondrial carrier domain 87 382 IPR023395 -
Bma10g00889 386 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 386 - -
Bma10g00889 386 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma10g00889 386 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma10g00889 386 PRINTS Adenine nucleotide translocator signature 189 202 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma10g00889 386 PRINTS Adenine nucleotide translocator signature 163 175 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma10g00889 386 PRINTS Adenine nucleotide translocator signature 294 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma10g00889 386 SUPERFAMILY Mitochondrial carrier 84 371 IPR023395 -
Bma10g00889 386 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Bma10g00889 386 PRINTS Mitochondrial carrier protein signature 298 320 IPR002067 GO:0055085
Bma10g00889 386 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Bma10g00889 386 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Bma10g00889 386 PRINTS Mitochondrial carrier protein signature 254 272 IPR002067 GO:0055085
Bma10g00889 386 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00567 Bma-Chr8:33843737 Bma10g00889 Bma-Chr10:16891152 0 dispersed
Bma09g00848 Bma-Chr9:47512342 Bma10g00889 Bma-Chr10:16891152 0 dispersed
Bma10g00889 Bma-Chr10:16891152 Bma13g00138 Bma-Chr13:1455472 0 dispersed
Bma10g00889 Bma-Chr10:16891152 Bma10g00896 Bma-Chr10:17133712 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00889 K05863 - zju:107417672 655.21