Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00936 ATGAGGAAAACAGGAGGAAAGCCTGCTCCTAGCTCTGGCAGCCCATGGTACGGGCCTGACAGAGTCAAGTACCTCGGCCCGTTTTCCGGCGAGGCGCCATCGTATTTGACCGGCCAGTTTCCCGGAGATTACGGATGGGACACTGCCGGATTATCAGCCGACCCCGAGACATTTGCCAAAAACCGAGAGCTCGAAGTCATTCACTGCAGGTGGGCCATGCTCGGGGCATTGGGATGTGTATTCCCGGAGCTCCTCTCTAGAAACGGGGTCAAGTTCGGCGAAGCCGTCTGGTTCAAAGCCGGTTCACAAATATTCAGCGAGGGAGGGCTGGACTACCTCGGAAACCCAAGCCTGGTTCATGCACAGAGCATTTTGGCCATTTGGGCATCTCAAGTTATCTTGATGGGTGCCGTTGAGGGTTACCGCATTGCCGGAGGGCCACTCGGGGAGGTGACCGACCCCATCTACCCAGGAGGAAGCTTTGATCCCCTGGGACTTGCTGATGACCCAGAGGCATTTGCCGAGCTTAAGGTGAAAGAAATCAAGAATGGACGACTAGCTATGTTCTCCATGTTCGGATTCTTCGTGCAAGCCATTGTCACCGGAAAGGGACCTTTGGAGAACCTCGCCGATCATCTGGCCGACCCTGTAAACAACAACGCTTGGGCTTATGCTACAAACTTTGTACCTGGAAAGTGA 699 54.65 MRKTGGKPAPSSGSPWYGPDRVKYLGPFSGEAPSYLTGQFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19395776 19396474 + Bma004775.1 Bma10g00936 89999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00936 232 SUPERFAMILY Chlorophyll a-b binding protein 15 229 - -
Bma10g00936 232 Pfam Chlorophyll A-B binding protein 32 198 IPR022796 -
Bma10g00936 232 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 232 IPR001344 GO:0009765|GO:0016020
Bma10g00936 232 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 232 - -
Bma10g00936 232 Gene3D Chlorophyll a/b binding protein domain 23 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00936 Bma-Chr10:19395776 Bma14g00935 Bma-Chr14:10678062 2.35E-167 dispersed
Bma10g00936 Bma-Chr10:19395776 Bma14g00933 Bma-Chr14:10657380 1.22E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00936 K08912 - rcu:8265899 471.855