Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00957 ATTGTGCTCCCAACTGCGCCAGCTATCTCTGATTTGCCACTTCCAGCTTATATGCCACTTCTCCGTAGACAATGGCAAAAACATATATCACCTCATGGTGCACCGAGAGCTGTATCAGCACCCATCAACCCTCCATATTTTGGTCATCTATCTACTTCGGATCCATCACCTGCAAGCTCAAGTTTGTCTAGACCATTGATGAAGAAGAGTGGAATTGTACCTCCTAATGCTGGATTCGAAAGCATTGCTCCAACACAGTCCAATGCTGGTTTACCTCAGCCCCCACTGTCTCCTGCTTCTGACTGTTGCAAACCAGACATGGTTCTGAAGCGAGGAAGTCAAGATTGCCACTGTGTATATCCCATAAAGCTTGACCTTCTCCTTTTGAACGTCTCACAAAATCCTAATTGGAATCTTTTCCTTGAGGAATTAGCTTCCCAGCTCGGTTTGCGAGTTTCTCAGATTGACCTTATAAACTTCTATGTACTTAGCTATTCGAGATTAAATCTTTCAATGGACATAACTCCACATACAGGAATCAGTTTCTCTGCTAAGGATGCAGAGTCAATAAACTCTTCGCTTGCCATGCATAAGGTTCATTTAAACCCTACTTTAGTGGGAGACTATAAACTTCTCAATATGACCTGGTTTAAGCCCCCACCTCCTTCTGAAGCTCCTCATGCAACACCATCTCCTGTGGCAACCCCTGTGTATCCATCATCAGCTTCTACATCAGCCCATTCTTCTAATAAAGGGAAACATTCATACCTGATTCTTATTCTCGGAATTGGTGCTGGTCTGCTGTTTATTGCCATTTTCTCCATGCTGGTTTTGTGTTTGTACTTCTATCATAATAGGAAAACTAAAGCATCGCCAGTGATAGCAGAAAAAACAAGAACTGTGGAAGCAGTTTCTGCTGGAGGATCTTTTGCCCATCCAACCAGTACAAGATTTCTAGCTTATGAAGAACTGAAAGAAGCAACCAATAACTTTGAAGCTGCAAGCATACTAGGAGAGGGTGGCTTCGGCAGGGTTTTCAGGGGTGTCTTAAGTGACGGCACTCCTGTTGCTATAAAGAGGCTTACCAGTGGAGGGCAACAAGGGGACAAAGAATTTCTGGTTGAGGTTGAGATGCTTAGCAGGTTGCATCACCGTAATCTTGTGAAACTTGTAGGTTACTTTAGCAATCGTGACTCATCACAGAACCTATTGTGCTATGAACTTGTACCAAATGGGAGTTTAGAATCCTGGCTCCATGGTCCACTTGGATTAAACTGCCCCTTAGATTGGGACACCAGAATGAAAATTGCACTGGATGCAGCTAGAGGACTTGCATACCTCCATGAGGACTCGCAACCTTGTGTTATCCATAGAGACTTCAAGGCATCCAATATTTTGCTCGAGAACAACTTTAATGCTAAAGTTGCTGATTTTGGCCTGGCAAAACAAGCTCCTGAAGGCAGAGCAAATTACCTATCTACGCGAGTGATGGGCACGTTTGGGTATGTAGCTCCTGAGTATGCAATGACTGGACATCTGCTCGTTAAAAGCGATGTTTATAGTTACGGGGTTGTTCTTCTTGAATTGATTACCGGAAGGAAGCCAGTGGATATGTCTCAACCATCTGGACAGGAAAACCTAGTAACTTGGACCAGACCAATTCTTAGAGACAAGGATAGGCTGGAAGAACTGGTTGATCCAAGGGTTGGAGGAAAATATCCCAAGGAAGACTTTTTACGGGTTTGCACGATAGCCGCAGCCTGTGTCGCTACCGAGGCCAACCAACGACCCACGATGGGCGAAGTTGTACAGTCACTGAAGATGGTGCAGCGCATCACAGAGTATCATGATTCAGCATTGCCACCTTCCAACAATCGACCCAACTTAAGACAATCATCTACCACTTTCGAGTCAGATGGGACATCGTCAGTATTCTCTTCCGGCCCCTATTCTGGCTTCAGTGCTTTTGACAACGACAACGTCTCTCGCATAGCGATTTTCTCCGAAGATCTTCACGAAGGAAGA 2025 44.74 IVLPTAPAISDLPLPAYMPLLRRQWQKHISPHGAPRAVSAPINPPYFGHLSTSDPSPASSSLSRPLMKKSGIVPPNAGFESIAPTQSNAGLPQPPLSPASDCCKPDMVLKRGSQDCHCVYPIKLDLLLLNVSQNPNWNLFLEELASQLGLRVSQIDLINFYVLSYSRLNLSMDITPHTGISFSAKDAESINSSLAMHKVHLNPTLVGDYKLLNMTWFKPPPPSEAPHATPSPVATPVYPSSASTSAHSSNKGKHSYLILILGIGAGLLFIAIFSMLVLCLYFYHNRKTKASPVIAEKTRTVEAVSAGGSFAHPTSTRFLAYEELKEATNNFEAASILGEGGFGRVFRGVLSDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLESWLHGPLGLNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFNAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDMSQPSGQENLVTWTRPILRDKDRLEELVDPRVGGKYPKEDFLRVCTIAAACVATEANQRPTMGEVVQSLKMVQRITEYHDSALPPSNNRPNLRQSSTTFESDGTSSVFSSGPYSGFSAFDNDNVSRIAIFSEDLHEGR 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20973031 20976848 + Bma030395 Bma10g00957 90020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00957 675 Gene3D Transferase(Phosphotransferase) domain 1 409 621 - -
Bma10g00957 675 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 6 675 - -
Bma10g00957 675 CDD STKc_IRAK 337 607 - -
Bma10g00957 675 ProSiteProfiles Protein kinase domain profile. 331 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00957 675 PANTHER OS01G0750732 PROTEIN 6 675 - -
Bma10g00957 675 MobiDBLite consensus disorder prediction 223 246 - -
Bma10g00957 675 Gene3D Phosphorylase Kinase; domain 1 312 408 - -
Bma10g00957 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Bma10g00957 675 Pfam Protein tyrosine and serine/threonine kinase 334 606 IPR001245 GO:0004672|GO:0006468
Bma10g00957 675 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Bma10g00957 675 MobiDBLite consensus disorder prediction 617 643 - -
Bma10g00957 675 SUPERFAMILY Protein kinase-like (PK-like) 309 608 IPR011009 -
Bma10g00957 675 MobiDBLite consensus disorder prediction 616 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00825 Bma-Chr9:47108775 Bma10g00957 Bma-Chr10:20973031 4.89E-86 dispersed
Bma10g00957 Bma-Chr10:20973031 Bma13g00737 Bma-Chr13:22676942 3.07E-127 dispersed
Bma15g00479 Bma-Chr15:5510121 Bma10g00957 Bma-Chr10:20973031 1.82E-92 dispersed
Bma10g00950 Bma-Chr10:20427784 Bma10g00957 Bma-Chr10:20973031 1.50E-59 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66751 PF07714 PK_Tyr_Ser-Thr 1.40E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00957 - - csv:101219278 1053.12