Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g01002 | ATGTCGCCGATCAAGGTTCATGGTACTCCTTTCTCAACCGCCGCTGCTCGCGTTCTCTGCTGTCTTTTCGAGAAAGATATCGAGTTCGACTTCGTCCTTGTTGATTTGAGAACTGGCGAACACAAGAAGGAGCCTTTCATCTCCCTCAATCCATTTGGCCATGTTCCAGGGTTTGAAGATGGAGATCTATCGCTATTCGTACCTTGTTTATGCGGTGCCTATCCTGAAAAGGCAGCCCATTTGATACCTTCGGACAAGAAGGAAATGGGTACAACATTGACATGGATGAATGTGGAGGCTCACCAATACGACCCCCCTGCGTCCAAGCTGGCTTTCGAGCTGTTTGTGAAGCCCATGCTGGGAATGGGGGCTGCCGATGCAGCAGCGGTGGCGGAAAATGAAGCTAAGTTGTGTAAAGTTCTGGATATATACAAAGTTAAATTGTCCAAGACGAAATACTTGGCTGGCGACTGCTTCACTCTGGCCGATCTGTATCATCTTCCTACTCTTACCTATTTGATGGCCACAGATGCTAAGAAGGTATTCGAATCACGCCCACATGTCAATCTCTGGGTTACTGAGATTATGTCCAGGCCATCTTGGGGTAAGGTCCTGGCAATGAGAAACACAGCTTGA | 636 | 48.11 | MSPIKVHGTPFSTAAARVLCCLFEKDIEFDFVLVDLRTGEHKKEPFISLNPFGHVPGFEDGDLSLFVPCLCGAYPEKAAHLIPSDKKEMGTTLTWMNVEAHQYDPPASKLAFELFVKPMLGMGAADAAAVAENEAKLCKVLDIYKVKLSKTKYLAGDCFTLADLYHLPTLTYLMATDAKKVFESRPHVNLWVTEIMSRPSWGKVLAMRNTA | 211 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 23846156 | 23847037 | - | Bma004887.1 | Bma10g01002 | 90065 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g01002 | 211 | Pfam | Glutathione S-transferase, C-terminal domain | 105 | 199 | IPR004046 | - | |
Bma10g01002 | 211 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Bma10g01002 | 211 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 4 | 210 | - | - | |
Bma10g01002 | 211 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 86 | IPR004045 | - | |
Bma10g01002 | 211 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 66 | IPR004045 | - | |
Bma10g01002 | 211 | Gene3D | - | 86 | 209 | - | - | |
Bma10g01002 | 211 | SUPERFAMILY | Thioredoxin-like | 1 | 66 | IPR036249 | - | |
Bma10g01002 | 211 | SFLD | Main (cytGST) | 1 | 208 | - | - | |
Bma10g01002 | 211 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 85 | 211 | IPR010987 | - | |
Bma10g01002 | 211 | SFLD | Main.5: Phi-like | 1 | 208 | - | - | |
Bma10g01002 | 211 | SUPERFAMILY | GST C-terminal domain-like | 80 | 206 | IPR036282 | - | |
Bma10g01002 | 211 | CDD | GST_C_Phi | 87 | 205 | IPR034347 | - | |
Bma10g01002 | 211 | PANTHER | GLUTATHIONE S-TRANSFERASE F6-RELATED | 4 | 210 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma10g01002 | Bma-Chr10:23846156 | Bma14g01123 | Bma-Chr14:14207084 | 6.21E-50 | dispersed | |
Bma04g01390 | Bma-Chr4:48154233 | Bma10g01002 | Bma-Chr10:23846156 | 2.39E-74 | transposed | |
Bma05g00815 | Bma-Chr5:45460686 | Bma10g01002 | Bma-Chr10:23846156 | 7.30E-06 | transposed | |
Bma13g00392 | Bma-Chr13:7149386 | Bma10g01002 | Bma-Chr10:23846156 | 1.07E-148 | transposed | |
Bma10g01002 | Bma-Chr10:23846156 | Bma13g00049 | Bma-Chr13:650788 | 1.22E-47 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g01002 | K00799 | - | csv:101212771 | 269.24 |