Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01010 ATGGCTGCTCCGCCGAGTATCGAGCTCCAAACCCTATTGCAGACGGCGGTGCAATCTATTCAATGGACATATACTGTCTTCTGGCAAATCTGTCCCCAGCAAGGAAATTTAGTATGGGGAGATGGGTACTACAATGGAACAATAAAGACGAGAAAAACAGTGCAGCCAATGGATGTTAACGATGAGGATGAGTGTCCTCTGAGAAGCCAGCAGCTGAGGGAGCTTTACCATTCCTTGATCGTCGGCAAGACGACTCCAACGGCAAAGCGACCTTGTGTGGCTCTGTCGCCGGAGGACTTGACTGAGTCCGAATGGTTCTACCTCATGTGTGCCTCTTTCTCTTTTCCACCAGGGGTAGGGTAA 363 50.14 MAAPPSIELQTLLQTAVQSIQWTYTVFWQICPQQGNLVWGDGYYNGTIKTRKTVQPMDVNDEDECPLRSQQLRELYHSLIVGKTTPTAKRPCVALSPEDLTESEWFYLMCASFSFPPGVG 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24745379 24745848 + Bma004903.1 Bma10g01010 90073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01010 120 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 119 IPR025610 -
Bma10g01010 120 PANTHER TRANSCRIPTION FACTOR TT8 8 120 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01010 Bma-Chr10:24745379 Bma12g00073 Bma-Chr12:1284561 2.67E-39 dispersed
Bma10g01010 Bma-Chr10:24745379 Bma14g00153 Bma-Chr14:2131378 8.61E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01010 - - jre:108986109 198.749