Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g01122 | ATGGATGAACCTTTTCTGTCTAGACCTGAAGGAGAAGGAGAATCTACCAGACTATCGACGAGAAGAGGATCTCCTTCTGGGTACATAGACATCGGACAATCCTATAGACGGTCAACTCCGCATCTAATCACAAGCGACACAATCATCCCAATTATCGCAACTCCGAGATCTCCGTACATAAACGTCCTATCCACTTCCCAGACACGAATCGCCGGCCGTTCCCACTCCGCGCCGGCGCTTTTCACCGACGTTAGGGAAGCGTTCCGACGTTCGTCCGACTCTAGGGCTTGTACGAAATTGCCCCCTTTGATCGTCCGGCAAGCTTTCATCGGCCTCATTCTGTACTTCGCGATCGGGGTAGTAATTTACCTCACCACCGGAAGTTTCAAAGGGCAAGCCACGTTTAAGCCAGTAGATGCTATGTACTTCACCGTCGTCACTCTGTGTACCATTGGGTATGGCGATATAGTTCCGGATTCCATATTTACAAAAATTTTTACTTGCGTTTTCATACTTGTTGGTTTTGGATTCCTTGACATTTTGCTCAACGGATTGGTCGTTTACATATGCGATCGTCAAGAGGCGGTCTTGCTGAGTACCGTCGACGAGAATCGATTCAACGCCATGATTAGAACTTATATGGTCGACAGAGAAAAGGGAAGAATGAGAATAAGAACGAAGGTGTGTTTGGCTGTTGGTATTGTGATTATCTGCATTGCAGTAGGGACAATCGCCATACATTTTCTGGAGACATTAACTTGGGTTGATAGCATCTACCTCTCGATTACTTCTGTGTCAACAGTGGGCTATGGAGATTTCTCTTTCACGACTGTCGAAGGAAGGTGCTTTGCAATTATCTGGCTGTTGGTCAGCACTTTGGCGGTTGCCAGGGCCTTTCTGTATCTGACTGAGTTCAGAATCGACAAAAGAAACAGAAAAACCATGACGTGGGTTCTTCAGAAGAAGATAACGATTGGGGATTTAGTGGCTGCCGACATAGATCACAATGGATTTATCAGCAAATCTGAGTTTGTCCTTTACAAGCTGAAAGAGATGGGGAAAATCTCAGAGAAAGATGTTGTAATGATCGGTAAACAATTTGATTTATTGGACGCCAGCAACTGTGGCAAAATAACACTAGCTGATCTCATGGAAGATTAA | 1161 | 45.22 | MDEPFLSRPEGEGESTRLSTRRGSPSGYIDIGQSYRRSTPHLITSDTIIPIIATPRSPYINVLSTSQTRIAGRSHSAPALFTDVREAFRRSSDSRACTKLPPLIVRQAFIGLILYFAIGVVIYLTTGSFKGQATFKPVDAMYFTVVTLCTIGYGDIVPDSIFTKIFTCVFILVGFGFLDILLNGLVVYICDRQEAVLLSTVDENRFNAMIRTYMVDREKGRMRIRTKVCLAVGIVIICIAVGTIAIHFLETLTWVDSIYLSITSVSTVGYGDFSFTTVEGRCFAIIWLLVSTLAVARAFLYLTEFRIDKRNRKTMTWVLQKKITIGDLVAADIDHNGFISKSEFVLYKLKEMGKISEKDVVMIGKQFDLLDASNCGKITLADLMED | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35936040 | 35937337 | + | Bma005120.1 | Bma10g01122 | 90185 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g01122 | 386 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Bma10g01122 | 386 | Gene3D | - | 328 | 386 | - | - | |
Bma10g01122 | 386 | Pfam | Ion channel | 234 | 304 | IPR013099 | - | |
Bma10g01122 | 386 | Pfam | Ion channel | 112 | 186 | IPR013099 | - | |
Bma10g01122 | 386 | PRINTS | Two pore domain K+ channel signature | 266 | 275 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Bma10g01122 | 386 | PRINTS | Two pore domain K+ channel signature | 146 | 174 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Bma10g01122 | 386 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 51 | 382 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Bma10g01122 | 386 | Gene3D | - | 197 | 327 | - | - | |
Bma10g01122 | 386 | ProSitePatterns | EF-hand calcium-binding domain. | 332 | 344 | IPR018247 | - | |
Bma10g01122 | 386 | PANTHER | OS01G0696100 PROTEIN | 51 | 382 | - | - | |
Bma10g01122 | 386 | Gene3D | - | 104 | 196 | - | - | |
Bma10g01122 | 386 | SUPERFAMILY | Voltage-gated potassium channels | 103 | 189 | - | - | |
Bma10g01122 | 386 | SUPERFAMILY | Voltage-gated potassium channels | 216 | 322 | - | - | |
Bma10g01122 | 386 | SUPERFAMILY | EF-hand | 330 | 384 | IPR011992 | - | |
Bma10g01122 | 386 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01341 | Bma-Chr3:28156926 | Bma10g01122 | Bma-Chr10:35936040 | 0 | dispersed | |
Bma07g00794 | Bma-Chr7:23806897 | Bma10g01122 | Bma-Chr10:35936040 | 3.49E-117 | dispersed | |
Bma07g01248 | Bma-Chr7:47466945 | Bma10g01122 | Bma-Chr10:35936040 | 1.42E-59 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g01122 | K05389 | - | cit:102629027 | 539.265 |