Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g01137 ATGAGAGATTTTAAGGAATTTTCTGCGCCATCTTCTCGTTGCGGGGCAGGAATCATCAGAAGTATCCGTTTGGAGAACTTCATGTGCCATAGTAATTTGGAAATCGAGCTTGGCGAGTGGGTCAACTTTATCACTGGTCAAAATGGAAGTGGAAAGAGCGCAATATTAACGGCTTTATGCGTTGCATTTGGGTGTCGAGCTAAAGGGACCCAAAGGGCATCTACTTTAAAGGATTTCATAAAAACTGGTTGCAGCTATGCCGTAGTTCACGTCCAATTAAGAAACGAAGGAGAAGAAGCTTTTAAGTCGGAAATATATGGTGATGTTGTTATTATTGAACGCAGAATTTCTGAGGCTAGCAATTCCACTATTTTAAAGGATTGCCAAGGAAAAAGGGTTTCCAGTCGGAAAGATGATCTTCGTGAGATAGTTGAACATTTTAATATTGATGTGGAGAATCCTTGTATGATAATGAGTCAGGACAAAAGTAGAGAGTTTCTGCATTCGGGAAATGACAAAGATAAATTTCAGTTTTTTTTCAAGGCTACACTTCTTCACCAAGTTAACGATCTCTTGAAGAATATTTTTGAACAATTGAGATCTGCAAATGCTCTAGTTGATGATTTGGAAGCCTCAATAAAACCTGTTGAGAAAGAACTTAGTGAGCTGAAAGGAAAGATAAAGAACATGGAGCATGTAGAAGAAATATCTCAACAGATTGAGCAAGTAAGTAAGAAGCTAGCATGGTCATGGGTATATGATGTGGACAGACAACTTCAGCAGCAAAGCACAAAGATTGCAAAGCTAAAAGACCGCATTCCTACGTGCCAAGCAAAAATTGATCGTCAATTGGATCGGGTGGAAAAATTGAGAAAATGCTTTTCTGAGAAAAAAGATCAGATAGCACGCATGATGGACAAAACTTCAGAAGTGAGAAGTATGAAGGATGAACTGCAAGAAACTCTTACTCAGGCAACAAAGGAGAAACTGTATCTTGAAGACGAGCATGGTCGTGAGATGAAGCACATGCAGAAGATGCTGCAGCACATCAGAATGCTTGAGCAGCAAGTCCGTAATATTCATGACCAGCATATTAGAGACACACAGGCTGAGGAGTCTGAAATAGAGGAAAAGTTGAAGGAGCTCCAGTCTGAGGTTGATTTAGCTCATTCTACGCTAACAAGGTTAAGGGACGAAGAAAGTGCATTATTTGAGTGCTTATCCACCGGAAAGAGTGAAATCAAAAGAATGGTTGTTGAGATTGAGGAATATGAGAAAAGACATCGTGAAATATCTTACTCAATTCGAGAGCTTTCGCAACATCAAATCAACAAGGTTACAGCTTTTGGTGGTGATAGAGTTATTAACCTGTTACGAGCTATTGAGACACAGTGCCATAGATTCCAACAGCCACCAATTGGTCCTATTGGTGCCCATGTGAACTTGGTTAATGGTGACACATGGGCTCCTGCAGTGGATAATGCTCTTGGGAAGTTGCTCAATGCTTTCATTGTTACAAATCATAGAGATTTTCTTCTTTTGAGAGGTTGTGCTAAGGAAGCTAACTACAAGAACCTTCAAATTATCATATACGACTTTTCAAGACCAAGGTTAAACATACCAACTCACATGCTTCCTCAAACAAGGCACCCTACGACTCTTTCAGTTATCCATTCCGAAAATCCTACAGTCATTAATGTCTTGGTGGATATGGGTAGTGCTGAGAGACAAGTGCTTGTTAAGGACTACGACGTGGGTAAAGCTGTTGCATTTGAACAGAAGATCACAAATCTGAAGGAAGTCCACACTTTAGATGGCTATAAAATGTTTAAGCGCGGTTCAGTTCAGACAATTCTCCCTCCGCCTAAGTGGCGCAAAACTGGGCGCCTTTGTAGTTCTTATGATGATCAAATTAACGGTCTTGAGAAAGATGCATCAAAATTAAAAGAAGAAAGTTATCAATGTAGGAGGAAGAAGAGAATTGCAGAAGAAGAACTTGGCCCACTTGAAGGCAAGTTGAACAGTACAAAGAAAAGGCGTGAGAGTGCAGAACGCATTTTGATGTCTAAGAATTTAATGCTGGAAGATTTGAAGAACTCTCGTGCTGCAGAAGAAAATACTTCTACAGCATCGTCAGTTGATGAGCTTCACGGAGAAATTTCTAAAGTCCAGGAGGAGATACAAGAAAGTGAGATATTGTTGGAAAGGCTGAGAGTCAAGGCGAATGAAGCAAAAACTAAGGCCAAAGATCTTAAACTATCTTTTGAGAATCTCTGTGAGTCAGCAAAAGGGGACATTGATGCATTTGAAGAGGCAGAAGGAGATCTGTTGCAGATAGAACGAGATCTAAATTCTGCAGAAAAGGAGAAGCATCATTATGAAGTTATTATGGCTAACAAGGTTCTTCCCGATATCACAGTAGCAGAGCGAGAATATCAGGATCTTGAAAGCCTCAGAGAGAAAAATTACAATAAAGCTTCTATTATTTGTCTGGAAAGTGACATTGAAGCTTCAAGCAATTCAGATGGAAGCATGCCTGAACAATTAAGTGCTCACTTAACTAGACTAAAAAAGCAACTTCAAAATGAAAGCCAGCGATTTTCTGATTCTATAGATGACTTGAGAATGAAATATGAGAAAAAAGAACCTACAATCTTGAGAAAAAGGCAGACTTATAAAGGCTTTCGAGAAAAATTGAATGCATGCGAGAAAGCGCTCGATCAGCGGTGGGGCAAGTTTCAAAGAAATGCAAATCTTTTGAAGCGGCAATTGACTTGGCAATTTAATGGTCATTTAAGAAAGAAAGGGATCAGTGGTCATATTAAAGTTAGTTATGAAGAAAAGACGTTGGCAGTTGAGGTGAAGATGCCCCAGGATGCATCGAGCAGTACTGTTCGTGACACTAGAGGACTTTCAGGTGGAGAACGATCATTTTCAACTTTATGTTTTGCATTAGCGCTTCACGAAATGACCGAGGCTCCATTTCGAGCGATGGATGAGTTTGATGTATTTATGGATGCAGTTAGTCGTAAAATCAGCTTAGACACTCTTGTCGATTTCGCATTAGCCCAAGGATCTCAATGGATATTTATCACACCTCATGATATCAGCATGGTGAAACAAGGGGAGAGGATTAAAAAGCAGCAAATGGCAGCCCCTAGATCTTGA 3168 39.93 MRDFKEFSAPSSRCGAGIIRSIRLENFMCHSNLEIELGEWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGCSYAVVHVQLRNEGEEAFKSEIYGDVVIIERRISEASNSTILKDCQGKRVSSRKDDLREIVEHFNIDVENPCMIMSQDKSREFLHSGNDKDKFQFFFKATLLHQVNDLLKNIFEQLRSANALVDDLEASIKPVEKELSELKGKIKNMEHVEEISQQIEQVSKKLAWSWVYDVDRQLQQQSTKIAKLKDRIPTCQAKIDRQLDRVEKLRKCFSEKKDQIARMMDKTSEVRSMKDELQETLTQATKEKLYLEDEHGREMKHMQKMLQHIRMLEQQVRNIHDQHIRDTQAEESEIEEKLKELQSEVDLAHSTLTRLRDEESALFECLSTGKSEIKRMVVEIEEYEKRHREISYSIRELSQHQINKVTAFGGDRVINLLRAIETQCHRFQQPPIGPIGAHVNLVNGDTWAPAVDNALGKLLNAFIVTNHRDFLLLRGCAKEANYKNLQIIIYDFSRPRLNIPTHMLPQTRHPTTLSVIHSENPTVINVLVDMGSAERQVLVKDYDVGKAVAFEQKITNLKEVHTLDGYKMFKRGSVQTILPPPKWRKTGRLCSSYDDQINGLEKDASKLKEESYQCRRKKRIAEEELGPLEGKLNSTKKRRESAERILMSKNLMLEDLKNSRAAEENTSTASSVDELHGEISKVQEEIQESEILLERLRVKANEAKTKAKDLKLSFENLCESAKGDIDAFEEAEGDLLQIERDLNSAEKEKHHYEVIMANKVLPDITVAEREYQDLESLREKNYNKASIICLESDIEASSNSDGSMPEQLSAHLTRLKKQLQNESQRFSDSIDDLRMKYEKKEPTILRKRQTYKGFREKLNACEKALDQRWGKFQRNANLLKRQLTWQFNGHLRKKGISGHIKVSYEEKTLAVEVKMPQDASSSTVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFITPHDISMVKQGERIKKQQMAAPRS 1055
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 38470123 38530003 - Bma005147.1 Bma10g01137 90200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g01137 1055 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 12 1055 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Bma10g01137 1055 Coils Coil 407 427 - -
Bma10g01137 1055 Coils Coil 769 789 - -
Bma10g01137 1055 Coils Coil 365 399 - -
Bma10g01137 1055 Coils Coil 343 363 - -
Bma10g01137 1055 Coils Coil 192 226 - -
Bma10g01137 1055 Pfam RecF/RecN/SMC N terminal domain 19 1047 IPR003395 -
Bma10g01137 1055 CDD ABC_SMC6_euk 959 1055 - -
Bma10g01137 1055 Coils Coil 315 335 - -
Bma10g01137 1055 Gene3D - 252 448 - -
Bma10g01137 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 1042 IPR027417 -
Bma10g01137 1055 Gene3D - 18 217 IPR027417 -
Bma10g01137 1055 SUPERFAMILY Smc hinge domain 455 615 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bma10g01137 1055 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 12 1055 - -
Bma10g01137 1055 Gene3D - 804 1051 IPR027417 -
Bma10g01137 1055 Coils Coil 713 754 - -
Bma10g01137 1055 Coils Coil 631 651 - -
Bma10g01137 1055 CDD ABC_SMC6_euk 19 173 - -
Bma10g01137 1055 Coils Coil 857 877 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00203 Bma-Chr8:2428464 Bma10g01137 Bma-Chr10:38470123 3.72E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g01137 K22804 - csv:101208493 1556.96