Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g01171 | GTTAGCAAGAGAATGTTGAGCGATGATGACAAGGATTTGTCGACGAAATGCCGTGAGAGGCGGCGCCGACGAATAGAGATGAGGCGTGTGGCGACTGCATCAATGGCGAGCTCATCTCATGCTGGGAGTCGAAGCGAGAGGGAGAGTCATTTAGAAGATCAGTCGGGCTCTAAACTCAAGCGTATTCGAGTAGGGAACTCGTCGTCTTCTTCCTTCGCCGACGACGCGGAGGACGATTCGGCAACGAAAGAGATGGTAGATGTCGTCTCGATGGTGGAGCCAGAGTTCGGGACTATGTCTATTTCCGGTAGGTCAAGAGAGATGGAGGACGCGATATCTGTACGAACAAGACTGTGTCAGCCGGCGATTTGCCGGCGGCAACCGATGCATTTCTTCGCAGTGTACGATGGACACGGAGGAGCTCACGTGGCGGAACTTTGTAGGGAAAGGATGGAGTCTTTGGTGGAGGAGGAGCTGACGACGGCTGGAAGTACGCGCTCCGAGACTGCGAGTGGAGGTGAGGAGGATGAGGAGGAATGGAAGAGGGTGCTGAAGAAGAGCTTCGAGAGGATGGACGAGGTGGCTCTGAGCACGTGCGCCTGTGGGAGCGTTGGGGGGCACTGCGGGTGCCTTCCTATGGAGGTCGCTCTCGGTGGGTCCACTGCCGTAGTTGCCATACTTACCCCCGAGCACATCGTCGTTGCAAACTGCGGCGACTCACGTGCCGTCCTTTGCCGTGGCAAAAGAGCAGTCCCTTTGTCCAATGATCACAAGCCGGATAGACCGGACGAATTAGCGAGAATCGAAGCGGCTGGCGGACGAGTTATTTTTGTCAACGGAGCTCGCGTTGAAGGCATTCTTGCTATGTCCCGAGCCATAGGGGACAAGTATTTAAAATCGGTCGTGATATCTGAGCCTGAAATCACATTCACAAAAAGGGAATCTGAAGATGAGTGTTTGATTCTTGCAAGTGATGGCTTATGGGACGTTATATCGAGCGACTTAGCCTGTGAAGTTGCCTCCAAGTGTCTCCAAGAAGGCGCTCCCACGACTTCTACTATCGATCTCAACGCATCTCCTCAGCCTAGAAACGAAGAAACCGAAGCGATTTATCCGTCCAGAAGTGCTCTAGCCGCTGCATTGCTCACTCGTCTCGCTTTGGGTCGGAAAAGTTGTGATAACATTAGTGTCATCGTCATCGATTTGAAGAAAAGTTGA | 1218 | 53.04 | VSKRMLSDDDKDLSTKCRERRRRRIEMRRVATASMASSSHAGSRSERESHLEDQSGSKLKRIRVGNSSSSSFADDAEDDSATKEMVDVVSMVEPEFGTMSISGRSREMEDAISVRTRLCQPAICRRQPMHFFAVYDGHGGAHVAELCRERMESLVEEELTTAGSTRSETASGGEEDEEEWKRVLKKSFERMDEVALSTCACGSVGGHCGCLPMEVALGGSTAVVAILTPEHIVVANCGDSRAVLCRGKRAVPLSNDHKPDRPDELARIEAAGGRVIFVNGARVEGILAMSRAIGDKYLKSVVISEPEITFTKRESEDECLILASDGLWDVISSDLACEVASKCLQEGAPTTSTIDLNASPQPRNEETEAIYPSRSALAAALLTRLALGRKSCDNISVIVIDLKKS | 405 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 41120187 | 41122471 | + | Bma005212.1 | Bma10g01171 | 90234 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g01171 | 405 | CDD | PP2Cc | 96 | 402 | IPR001932 | - | |
Bma10g01171 | 405 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bma10g01171 | 405 | MobiDBLite | consensus disorder prediction | 43 | 59 | - | - | |
Bma10g01171 | 405 | ProSitePatterns | PPM-type phosphatase domain signature. | 131 | 139 | IPR000222 | GO:0043169 | |
Bma10g01171 | 405 | MobiDBLite | consensus disorder prediction | 60 | 75 | - | - | |
Bma10g01171 | 405 | Pfam | Protein phosphatase 2C | 96 | 354 | IPR001932 | - | |
Bma10g01171 | 405 | ProSiteProfiles | PPM-type phosphatase domain profile. | 95 | 402 | IPR001932 | - | |
Bma10g01171 | 405 | Gene3D | - | 88 | 405 | IPR036457 | - | |
Bma10g01171 | 405 | SUPERFAMILY | PP2C-like | 95 | 403 | IPR036457 | - | |
Bma10g01171 | 405 | PANTHER | ALPHABET, ISOFORM E-RELATED | 36 | 404 | - | - | |
Bma10g01171 | 405 | MobiDBLite | consensus disorder prediction | 1 | 81 | - | - | |
Bma10g01171 | 405 | MobiDBLite | consensus disorder prediction | 157 | 178 | - | - | |
Bma10g01171 | 405 | PANTHER | PROTEIN PHOSPHATASE 2C 75-RELATED | 36 | 404 | - | - | |
Bma10g01171 | 405 | SMART | PP2C_4 | 78 | 400 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00142 | Bma-Chr3:1069355 | Bma10g01171 | Bma-Chr10:41120187 | 5.32E-89 | dispersed | |
Bma07g00086 | Bma-Chr7:1652327 | Bma10g01171 | Bma-Chr10:41120187 | 1.26E-82 | dispersed | |
Bma10g01171 | Bma-Chr10:41120187 | Bma11g00104 | Bma-Chr11:1042831 | 1.10E-76 | dispersed | |
Bma10g01171 | Bma-Chr10:41120187 | Bma14g00520 | Bma-Chr14:5779888 | 2.57E-96 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g01171 | K14497 | - | zju:107414392 | 499.59 |